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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG003052.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GATA |
Protein Properties |
Length: 308aa MW: 34270.9 Da PI: 6.4302 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG003052.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 55.7 | 6.6e-18 | 224 | 258 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +Cg+ kTp+WR gp g+ktLCnaCG++y++ +l
CCG003052.1 224 CLHCGAEKTPQWRTGPMGPKTLCNACGVRYKSGRL 258
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 308 aa
Download sequence Send
to blast |
MEGPKFFTGG YNDCGATEFF SEKKSSDQKA DQHFTVEDLL NFPNDDDDDI MAGGFFSDID 60 GIKTTKKNCI TANHSFTNTH SFSSASVEYG QTFADSQFST ELCFLYDDMA ELEWLSNFVD 120 DSFSTDQSLQ TNIHVLSGSK PPTPESSSSE THHPEPITCN PSNPAFQPET PLPGKARSKR 180 SRPAPCDWST RLLHVPSTTK MSSEKQLREN PDPNLDSNAI VRRCLHCGAE KTPQWRTGPM 240 GPKTLCNACG VRYKSGRLVP EYRPAASPTF VSAKHSNSHR KVLELRRQKE MQGAQQHQFL 300 SQSSIFGV
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