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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CCG001761.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family | bZIP | ||||||||
Protein Properties | Length: 605aa MW: 65943.9 Da PI: 6.8151 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31.6 | 3.6e-10 | 430 | 487 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr++r NR +A rs +RK +i eLe kv++L++e ++L +l l+ + l+++ CCG001761.1 430 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQ 487 9********************************************9998877666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-17 | 426 | 490 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.737 | 428 | 491 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-10 | 430 | 486 | No hit | No description |
Pfam | PF00170 | 9.3E-9 | 430 | 484 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.52E-11 | 430 | 481 | No hit | No description |
CDD | cd14703 | 1.87E-24 | 431 | 480 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence Send to blast |
MGDTEEANSE MIQRLQSSFG TTQSSSTTMA KQPFSLINQI DVSQLSLNPT QMRARHFTNF 60 SQNFSGDSNK RVGFPPSHPN QIPPISPYSQ IPVSRPVNQQ MGPQSFSLGP THSRSLSQPS 120 SFFSLDSLPP LSPAPFRDSS SPSVPDPVST DVFMEEKDGG SHSLLPPSPF NRGNAPRVVE 180 SLPPRKAHRR SNSDIPFGLA NVLQCSPPLI PSRGSSGLER SMSGRENLGM AKPAQSVKKE 240 WERGGDSNAE GMGERKSEGE VVDDLFSAYM NLDNIDVLNS SGTDEKNGNE NREDLDSRAS 300 GTKTNGGDSS DNEAESSVNE SGGNLPRAGL SSSTEKREGI KRSAGGDIAP TSRHYRSVSM 360 DSFMGKLNFG NESPKLPPSP GTRPGQLSPT DSIDGNAFSL DFGNGEFSGA ELKKIMANEK 420 LAEIALADPK RAKRILANRQ SAARSKERKM RYISELEHKV QTLQTEATTL SAQLTLLQRD 480 SVGLTNQNNE LKFRIQAMEQ QAQLRDALNE ALTAEVRRLK IATAEQGGDS DPSKSMVQQQ 540 LSINPQMFMQ QPRPSQLGMH QLQQQSSASQ INMHQLQQQQ QQQQQSSQPQ PQQNGNTAPK 600 PDSNQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011037233.1 | 0.0 | PREDICTED: transcription factor RF2a-like | ||||
TrEMBL | A0A2K2AVN7 | 0.0 | A0A2K2AVN7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0004s17080.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2272 | 34 | 84 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38900.3 | 1e-144 | bZIP family protein |