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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CCG001742.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Family |
GATA |
Protein Properties |
Length: 328aa MW: 36380.6 Da PI: 7.698 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CCG001742.1 | genome | LZU | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 56.8 | 3e-18 | 247 | 280 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs+C++ kTp+WR gp g ktLCnaCG++y++ +
CCG001742.1 247 CSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGR 280
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MEFCMETRAL KSSLRNELAT KSTQQAISED FFAFNTPAVV SSDQDFSVDC FLDFSNGEFK 60 DGYAQEEEEE KDSLSVSSQD VADDDFHSNS SSFSDSFLSS ELAVPTDDIA ELEWVSHFVD 120 DSLSDVSLLV PACKGKPESH AKNRFEPEPK PSLAKIPGFF PSRVPSKART KRSRRTGRTW 180 SGRSNQTETP SSSASSASSM PCLVSANTVQ TIDSLSWLSE PPMKKPKKRL AVQTSGITGS 240 PQFQRRCSHC QVQKTPQWRT GPLGAKTLCN ACGVRYKSGR LFPEYRPACS PTFSSEVHSN 300 SHRKVLEMRR KKEMGGPESR LNQMVPSF
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. May be involved in the regulation of some light-responsive genes (By similarity). {ECO:0000250}. |