PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus

Family

bZIP

Protein Properties

Length: 415aa MW: 44943.8 Da PI: 8.6946

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CCG001613.2	genome	LZU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	49.6	8.9e-16	207	262	3	58
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 + kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN++L k+l ++++ k CCG001613.2 207 DAKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADTSQKYNK 262 689****************************************9888877777765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	4.1E-19	205	269	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.2E-12	206	262	No hit	No description
PROSITE profile	PS50217	11.392	207	262	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.4E-13	208	261	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.73E-11	209	258	No hit	No description
PROSITE pattern	PS00036	0	212	227	IPR004827	Basic-leucine zipper domain
Pfam	PF12498	4.7E-44	276	403	IPR020983	Basic leucine-zipper, C-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0071215	Biological Process	cellular response to abscisic acid stimulus
GO:0071333	Biological Process	cellular response to glucose stimulus
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0042802	Molecular Function	identical protein binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0046982	Molecular Function	protein heterodimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 415 aa Download sequence Send to blast
MNRSESEWAF QRFLQEASAA TFDDNTPNSS ADKTDVVHIN DYGYSNNNAT SKSCDNNYKE 60 NAMPLSNGAC ATAASLSLGA PADIPVDSED YHAFLKSKLN MACAAVALSR AYFVKPLKSP 120 ATAESGSQAS STSHLGSHAP SKGAGHDLSR SREKDANEPL GNPSLPSMQK KLAVTGKPTT 180 SGSSRELSED DENEAETKIT ENMHPADAKR VRRMLSNRES ARRSRRRKQA HLTELETQVA 240 QLRVENSSLL KRLADTSQKY NKSAVDNRIL KADIETLREK VRMAEEKVKR FTGLNHVFHA 300 MPDVSTMSMP SFDGCPSDTS ADAAVPVKDD SKHHIYQAPN NAISTHDSRP RVNFVLADIS 360 SVENVQPNSG TAAGVSGNKL GRTASLQRVA SLERLQKRIR GGASPCGPQS NGEQS

Sequence ? help Back to Top

Protein Sequence Length: 415 aa Download sequence Send to blast

MNRSESEWAF QRFLQEASAA TFDDNTPNSS ADKTDVVHIN DYGYSNNNAT SKSCDNNYKE  60
NAMPLSNGAC ATAASLSLGA PADIPVDSED YHAFLKSKLN MACAAVALSR AYFVKPLKSP  120
ATAESGSQAS STSHLGSHAP SKGAGHDLSR SREKDANEPL GNPSLPSMQK KLAVTGKPTT  180
SGSSRELSED DENEAETKIT ENMHPADAKR VRRMLSNRES ARRSRRRKQA HLTELETQVA  240
QLRVENSSLL KRLADTSQKY NKSAVDNRIL KADIETLREK VRMAEEKVKR FTGLNHVFHA  300
MPDVSTMSMP SFDGCPSDTS ADAAVPVKDD SKHHIYQAPN NAISTHDSRP RVNFVLADIS  360
SVENVQPNSG TAAGVSGNKL GRTASLQRVA SLERLQKRIR GGASPCGPQS NGEQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	221	228	RRSRRRKQ
2	223	228	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00040	PBM	Transfer from AT5G28770	Download

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF148294	0.0	EF148294.1 Populus trichocarpa x Populus deltoides clone WS01312_M14 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011032410.1	0.0	PREDICTED: light-inducible protein CPRF2
Swissprot	Q99090	1e-117	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A2K2ABZ1	0.0	A0A2K2ABZ1_POPTR; Uncharacterized protein
STRING	POPTR_0005s05470.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF4176	33	58

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	7e-71	bZIP family protein

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]