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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
CCG000689.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
|
| Family |
MYB |
| Protein Properties |
Length: 221aa MW: 25061.5 Da PI: 8.9731 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CCG000689.1 | genome | LZU | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 14 | 60 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
g+W+++Ed++l d+++++G g+W+ ++ g+ R++k+c++rw +yl
CCG000689.1 14 GAWSKQEDQKLTDYIRKHGEGCWRYLPQAAGLLRCGKSCRLRWINYL 60
79*****************************99************97 PP
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| 2 | Myb_DNA-binding | 53.4 | 5.7e-17 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
CCG000689.1 66 RGNFGEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111
89********************.*********.************986 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 221 aa
Download sequence Send
to blast |
MGKPGRDKQA KNQGAWSKQE DQKLTDYIRK HGEGCWRYLP QAAGLLRCGK SCRLRWINYL 60
RPDLKRGNFG EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLINMGV 120
DPNNHHLKQN LLRPHNPPNP ASASSSGLKV QATQQPTKLH VDKEQVSDAL SCVEDDPCAL 180
PDLNLDLTES FHYPSILHVE GNLKDSRPLD IAPSPTLLLF Q
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription repressor involved in regulation of protection against UV. Mediates transcriptional repression of CYP73A5, the gene encoding trans-cinnamate 4-monooxygenase, thereby regulating the accumulation of the UV-protectant compound sinapoylmalate. {ECO:0000269|PubMed:11080161}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Down-regulated by exposure to UV-B light. {ECO:0000269|PubMed:11080161}. |
| Publications
? help Back to Top |
- Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
BMC Plant Biol., 2013. 13: p. 229
[PMID:24377444] - Schenke D,Cai D,Scheel D
Suppression of UV-B stress responses by flg22 is regulated at the chromatin level via histone modification.
Plant Cell Environ., 2014. 37(7): p. 1716-21
[PMID:24450952] - Zhou M, et al.
Changing a conserved amino acid in R2R3-MYB transcription repressors results in cytoplasmic accumulation and abolishes their repressive activity in Arabidopsis.
Plant J., 2015. 84(2): p. 395-403
[PMID:26332741] - Zhang J, et al.
Soybean SPX1 is an important component of the response to phosphate deficiency for phosphorus homeostasis.
Plant Sci., 2016. 248: p. 82-91
[PMID:27181950] - Zhou M, et al.
LNK1 and LNK2 Corepressors Interact with the MYB3 Transcription Factor in Phenylpropanoid Biosynthesis.
Plant Physiol., 2017. 174(3): p. 1348-1358
[PMID:28483877] - Mondal SK,Roy S
Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
[PMID:28490275] - Verma N,Burma PK
Regulation of tapetum-specific A9 promoter by transcription factors AtMYB80, AtMYB1 and AtMYB4 in Arabidopsis thaliana and Nicotiana tabacum.
Plant J., 2017. 92(3): p. 481-494
[PMID:28849604]
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