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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA11g13550 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | C2H2 | ||||||||
Protein Properties | Length: 173aa MW: 19737.7 Da PI: 9.4419 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.1 | 0.00059 | 49 | 71 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+k+F++ L H +H CA11g13550 49 FECKTCNKHFPSFQALGGHRASH 71 89**********99999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13912 | 2.5E-11 | 49 | 73 | IPR007087 | Zinc finger, C2H2 |
SuperFamily | SSF57667 | 1.19E-6 | 49 | 114 | No hit | No description |
SMART | SM00355 | 0.15 | 49 | 71 | IPR015880 | Zinc finger, C2H2-like |
PROSITE profile | PS50157 | 9.515 | 49 | 76 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 51 | 71 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS50157 | 8.954 | 92 | 119 | IPR007087 | Zinc finger, C2H2 |
Pfam | PF13912 | 8.7E-8 | 92 | 117 | IPR007087 | Zinc finger, C2H2 |
SMART | SM00355 | 1 | 92 | 114 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 94 | 114 | IPR007087 | Zinc finger, C2H2 |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 173 aa Download sequence Send to blast |
MTTLKRSREN DMQIEAEAMA NCALMLLSRL NNHNDNNSSS SSDHHINDFE CKTCNKHFPS 60 FQALGGHRAS HNKRPRLFGE YLVQTKKNNK IHKCSICCME FSLGQALGGH MRRHRDEISK 120 TLMAKIPVLK KSNSSKRIFC LDLNLTPNDY HVDDLKLWPA TLISSPVFRC FF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor that may be involved in stress responses. {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016557480.1 | 1e-127 | PREDICTED: zinc finger protein ZAT11-like | ||||
Swissprot | Q9SLD4 | 1e-34 | ZAT11_ARATH; Zinc finger protein ZAT11 | ||||
TrEMBL | A0A1U8FFJ6 | 1e-125 | A0A1U8FFJ6_CAPAN; Uncharacterized protein | ||||
TrEMBL | A0A2G2YG63 | 1e-125 | A0A2G2YG63_CAPAN; zinc finger protein ZAT11-like | ||||
STRING | PGSC0003DMT400040206 | 3e-87 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA366 | 24 | 150 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37430.1 | 5e-35 | C2H2 family protein |