 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
CA11g03130 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
| Family |
bHLH |
| Protein Properties |
Length: 211aa MW: 24515.8 Da PI: 10.3127 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CA11g03130 | genome | PEP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 27.4 | 5.9e-09 | 20 | 65 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54
+Er+RR+++ + +++Lr l+P+ +K ++ Le+ v+Y+k+L
CA11g03130 20 DVERQRRRDMAKLYQRLRLLIPSkY---LMGKRAISDHLEEIVDYVKDL 65
79*********************77...999****************99 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MKKKEVEEKK KKNKNVLRRD VERQRRRDMA KLYQRLRLLI PSKYLMGKRA ISDHLEEIVD 60
YVKDLRKDIE ELERKRESLK EKKNMTPSSS SSMKLSDDED RIIVKSCNEE VEISVKGGIS 120
ISKVVKVVMK EGLIVNSCVS STVDQSLHHI IQSEVIKLLI NLFFSHTTTK RGFFHCESMI 180
NSFFSLFIDL IKKVMRIATK CFSVENFNGK *
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 8 | 18 | KKKKNKNVLRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG975519 | 5e-47 | HG975519.1 Solanum lycopersicum chromosome ch07, complete genome. |
