PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA10g20850
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 464aa    MW: 52556.9 Da    PI: 6.5782
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA10g20850genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.41.8e-09170209541
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                 k  rr+++NReAAr+sR RKka+i++Le    + ++Le+e
  CA10g20850 170 KTLRRLAQNREAARKSRIRKKAYIQQLESsriRLAQLEQE 209
                 6789***********************9633355555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-8165213No hitNo description
SMARTSM003381.6E-6166245IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.783168212IPR004827Basic-leucine zipper domain
CDDcd147085.13E-21170222No hitNo description
PfamPF077168.1E-7170212IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.97E-7170212No hitNo description
PROSITE patternPS000360173188IPR004827Basic-leucine zipper domain
PfamPF141443.6E-30261335IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MGLQSHDNQI SFGSHDHHQY HQQPQQHQHQ HQHQHLLFHD QQNNADQITF GMLHQSSSVI  60
PENFVSKENS STGGYDIGEL DDQALFLYLD AQDTSSNHDQ IQNNSEMMRP PTLNIFPSQP  120
MHVEPSFTKG NAGFISSGSE KSSEPSMMEL SKTKNNALST SSGPEPKVPK TLRRLAQNRE  180
AARKSRIRKK AYIQQLESSR IRLAQLEQEL QRARSQGFHF AGSALLGGEQ GLSGNIGNIS  240
SDAAVFDMEY SRWLEEHHRL MCELRNALTE HFPENELRMY VDNCVSHYDE IMNLKAMLLK  300
SDVFHLVSGT WKTPAERCFI WMGDFRPSEI IKIILSQIEP LTEQQFVGIC GLQQSTQEAE  360
EALSQGLESL NQSVSDTIVS DALLANSPQN MANYMGQMAL AINKLSTLEG FVRQADNLRH  420
QTIHRLHQIL TSRQAARCFL AIAEYFHRLR ALSSLWIARP RQE*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016543859.10.0PREDICTED: transcription factor TGA2-like
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A1U8EIZ50.0A0A1U8EIZ5_CAPAN; transcription factor TGA2-like
STRINGSolyc10g078670.1.10.0(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22792145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.11e-177bZIP family protein