![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
CA10g19380 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family |
bZIP |
Protein Properties |
Length: 443aa MW: 49850.8 Da PI: 6.872 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
CA10g19380 | genome | PEP | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Can&pid=CA10g19380) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 35 | 3e-11 | 150 | 187 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLe 39
k rr+++NReAAr+sR+RKka++++Le+ + ++Le
CA10g19380 150 KTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLE 187
7789***********************96333555555 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 443 aa
Download sequence Send
to blast |
MENNNNHHHQ ISFGLFQQSP SSSSANPDEN FISKENGGAY DLGELDQALF LYLDGQDHPS 60 SSIQDQRQNN YGMRPPTLNI FPSQPMHIEP SSTKETIGLV SQSTTSGSKK TSQPSTDKTE 120 PPPKVPKREG SGKSPTSSQE QDAPKTPDPK TLRRLAQNRE AARKSRLRKK AYVQQLETSR 180 IRLAQLEHEI QRARSQGFHV GGNVLHGGDQ GFQINRTNIS SDAAAFNLEY ARWLEEHHKL 240 LCELRNAIFE EQLQEDELRI YVENCVAHYD NMMNFKGILA KSDVFHLVSG LWKSPAERCF 300 LWIGDFRPSE LLKIIVNQID ALTENQVLGL CALQQSTQEA EDVLSQGLEA LNQSVSDTII 360 ASDALIMGNN ENMGNYMALA INKLSTLEAY LRQADNLRHQ TIHRLHQSLT TRQAARCFLA 420 IGDYFHRLRA LSSLWLARPR HE*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | HG975449 | 1e-95 | HG975449.1 Solanum pennellii chromosome ch10, complete genome. |