PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA06g21040

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 306aa MW: 34131.3 Da PI: 8.0863

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA06g21040	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	28.3	3.1e-09	148	195	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L+ l+P + +k Ka +L + ++Y++sLq CA06g21040 148 SHSLAERVRREKISERMKILQALVPGC----DKVTGKALMLDEIINYVRSLQ 195 8***********************9....555***************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
CDD	cd00083	1.28E-10	142	199	No hit	No description
SuperFamily	SSF47459	2.36E-17	142	212	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	15.555	144	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	1.0E-16	144	212	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.8E-6	148	195	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	3.5E-10	150	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 306 aa Download sequence Send to blast
MEANSNSFHL DSLYLPIKMS TFLEEPDNTS LPNCISQFYQ TESNLQEFPV SMSSSHVTNK 60 SNSSSVADKR ENKEPITNSV DTKRNSEGSS SMTSAQSKNV KKGDDGIKQR KRNGNVTKEK 120 KIKEKKAPEE APTGYVHVRA RRGQATDSHS LAERVRREKI SERMKILQAL VPGCDKVTGK 180 ALMLDEIINY VRSLQNQVEF LSMKLASLNP MYYDFGMELD ALMVRPHDQS WSGLEAAVEN 240 TNISGYPLLD SSTSVSFQQF HLPNSISQGN GQVLWGVDDQ RQKMIINHSG FISNNNNNLC 300 SFPSI*

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016576934.1	0.0	PREDICTED: transcription factor bHLH137-like isoform X1
Refseq	XP_016576935.1	0.0	PREDICTED: transcription factor bHLH137-like isoform X1
TrEMBL	A0A1U8H0N0	0.0	A0A1U8H0N0_CAPAN; transcription factor bHLH137-like isoform X1
TrEMBL	A0A1U8H909	0.0	A0A1U8H909_CAPAN; Transcription factor bHLH49
STRING	Solyc06g072520.1.1	1e-137	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA4116	23	45

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G50915.2	2e-50	bHLH family protein