PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Protein Features |

Gene Ontology |

Orthologous Group |

Basic Information? help Back to Top

TF ID

CA06g06440

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

bHLH

Protein Properties

Length: 241aa MW: 27677.1 Da PI: 7.5339

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA06g06440	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34	5.3e-11	87	139	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++++h e Er+RR+++ + ++ Lr+ lP + ++K s ++ A +YI +Lq CA06g06440 87 KKVMHRETERQRRQEMSTLYACLRQQLPLeN---IKGKRSTSDHILVAANYIEQLQ 139 6899***********************66...*******************9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	4.58E-14	83	156	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	9.63E-9	84	143	No hit	No description
PROSITE profile	PS50888	12.557	86	138	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	2.8E-8	87	139	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	2.2E-8	88	157	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SMART	SM00353	0.0091	92	144	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 241 aa Download sequence Send to blast
MDNFHSMFPL QQDDDANDSH RQLFFPHHEP YTNPSNFIYQ EDLVTDFTPF DSLELGDNNL 60 RFNNNNNQRG NRLQKWSVAS TEENKQKKVM HRETERQRRQ EMSTLYACLR QQLPLENIKG 120 KRSTSDHILV AANYIEQLQK NVKHLEERRE KLKKESIGLS NLDYPKSGSS STSSSSPATI 180 VTVKECLDGM EILVNCCLKN EGFRLSRVLQ VLLQEGLSIV NCSCTKTNSK SVLHTIRTEV 240 *

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	147	154	RREKLKKE

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016577192.1	1e-180	PREDICTED: transcription factor bHLH36-like
TrEMBL	A0A2G2Z8Z2	1e-179	A0A2G2Z8Z2_CAPAN; Uncharacterized protein
STRING	Solyc06g035490.2.1	1e-108	(Solanum lycopersicum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA598	24	109

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51780.1	1e-26	bHLH family protein