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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA06g02260 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NAC | ||||||||
Protein Properties | Length: 179aa MW: 20664.2 Da PI: 4.8333 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.9 | 1.7e-14 | 8 | 134 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv..ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 GfrFhP+d e + +L+k +++++++ + + +++d+y++ ePw++ + + a ++++y ++ ++k + + g Wk +g+ k+v++ CA06g02260 8 SGFRFHPNDTEGL-TFLQKFMAKQEMNDSGFiTTNIDVYDSeeEPWKIYSrgvpC-GAVDDSLYRYFITKK----------SSNLGNWKLQGEGKPVYR 94 7**********99.99*********99988834556***88668****7334432.223334443322222..........234699***********9 PP NAM 95 k...kgelvglkktLvfy...kgrapkgektdWvmheyrl 128 ++ ++g+kk + + +++ ++ W+m+ey+l CA06g02260 95 DsssSTVVIGCKKKMSYMinnNEELREDDGRYWLMKEYEL 134 86555566**********54322333344567******97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.63E-19 | 5 | 157 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.48 | 6 | 157 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.1E-11 | 8 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 179 aa Download sequence Send to blast |
MEQKGVSSGF RFHPNDTEGL TFLQKFMAKQ EMNDSGFITT NIDVYDSEEE PWKIYSRGVP 60 CGAVDDSLYR YFITKKSSNL GNWKLQGEGK PVYRDSSSST VVIGCKKKMS YMINNNEELR 120 EDDGRYWLMK EYELSNVILH HFDDDRRDYV LCAIKKKLIE TCFSEIENVS EEFGAIQV* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560607.1 | 3e-68 | PREDICTED: protein NTM1-like 9 | ||||
TrEMBL | A0A2G2Z757 | 1e-130 | A0A2G2Z757_CAPAN; Uncharacterized protein | ||||
STRING | XP_009631312.1 | 3e-52 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2219 | 12 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 3e-09 | NAC domain containing protein 57 |