PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA05g18760
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 150aa    MW: 17032.2 Da    PI: 10.0121
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA05g18760genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.000812244123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                ++C+ C++ Fs+   L  H  +H
  CA05g18760 22 FECKTCNRQFSSFQALGGHRASH 44
                89**********99999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576678.39E-92089No hitNo description
PfamPF139129.3E-132146IPR007087Zinc finger, C2H2
SMARTSM003550.22244IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.2422249IPR007087Zinc finger, C2H2
PROSITE patternPS0002802444IPR007087Zinc finger, C2H2
SMARTSM003550.276789IPR015880Zinc finger, C2H2-like
PROSITE profilePS501579.2036791IPR007087Zinc finger, C2H2
PfamPF139121.5E-106791IPR007087Zinc finger, C2H2
PROSITE patternPS0002806989IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MLFSHQQNHF DTSMTNSPGK VFECKTCNRQ FSSFQALGGH RASHKKPRLM GELNFQMPIS  60
PPKPKIHECS ICGLEFPIGQ ALGGHMRRHR GMLNENNSSN NIHQVPHHVV KKLSNSTPRA  120
LCLDLNLTPL ENDLXISYRT SFRWTYEKT*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in stress responses. {ECO:0000250}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754441e-119HG975444.1 Solanum pennellii chromosome ch05, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016574797.12e-96PREDICTED: zinc finger protein ZAT11-like
SwissprotQ9SLD42e-31ZAT11_ARATH; Zinc finger protein ZAT11
TrEMBLA0A2G2ZKB71e-103A0A2G2ZKB7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000605231e-72(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36624150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37430.18e-34C2H2 family protein