PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA04g23540
Common NamebZIP1
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bZIP
Protein Properties Length: 287aa    MW: 32266.3 Da    PI: 4.9811
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA04g23540genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.51.2e-07125166445
                 XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                 +k+ +r  +NR AA rsR+R+k ++  Le k+k +e+e k+L
  CA04g23540 125 DKKRKRQLRNRDAAVRSRERRKLYVRDLELKSKYFESECKRL 166
                 799***********************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-10121185No hitNo description
SMARTSM003380.0029122186IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.324124166IPR004827Basic-leucine zipper domain
PfamPF077166.9E-5126166IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-9126183No hitNo description
CDDcd147042.23E-13127178No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MVDNIDDIVA HINWDDVDHI FHNVLHDDLF TVHDPDPSAP NFQDIEQLLM NDDDVEDQAD  60
TQFAAEFLSD VLVDSPAQSH QSPSAEEEAF GFPDSKVSSG SEDDKDKVSH SPSDADELNN  120
DDPIDKKRKR QLRNRDAAVR SRERRKLYVR DLELKSKYFE SECKRLGFVL QCCLAENQAL  180
RFSLQNSSAN GVSMTKQESA VLLLESLLLG SLLWFLGISC LLILPSQTWS IPEENQGSRN  240
PGLLVPIKRG KKTSRSLAFL SFMMGKRCKA SRSRMKFNPH SLGIVM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1126145KRKRQLRNRDAAVRSRERRK
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY7753320.0AY775332.1 Capsicum annuum bZIP transcription factor protein (bZIP1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001311848.10.0bZIP transcription factor 60
SwissprotQ69XV02e-42BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLA0A1U8GA490.0A0A1U8GA49_CAPAN; bZIP transcription factor 60
TrEMBLQ3L0T70.0Q3L0T7_CAPAN; BZIP transcription factor protein
STRINGPGSC0003DMT4000259211e-142(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA71012128
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.14e-23basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Lee SC,Choi HW,Hwang IS,Choi DS,Hwang BK
    Functional roles of the pepper pathogen-induced bZIP transcription factor, CAbZIP1, in enhanced resistance to pathogen infection and environmental stresses.
    Planta, 2006. 224(5): p. 1209-25
    [PMID:16718483]
  2. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  3. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]