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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA04g17490 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bZIP | ||||||||
Protein Properties | Length: 140aa MW: 16255.5 Da PI: 7.1981 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.5 | 3.2e-14 | 54 | 111 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ rrk++NRe+ArrsR R k+ +++L+e v+ L+ eN++Lk++l + ++++ +se CA04g17490 54 RKRRRKISNRESARRSRFRQKKHVDNLTEQVDRLKVENRELKNRLCVVTHHCQAAQSE 111 6789*****************************************9999999988776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.4E-12 | 50 | 114 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.749 | 52 | 98 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.0E-10 | 52 | 106 | No hit | No description |
SuperFamily | SSF57959 | 9.14E-11 | 54 | 105 | No hit | No description |
Pfam | PF00170 | 1.6E-11 | 54 | 109 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.16E-14 | 55 | 106 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 57 | 72 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence Send to blast |
MFEDPVHYHL PVHEDVLSPS DIDEILSLLQ PELPVHESTS GSETTRLVFS LEERKRRRKI 60 SNRESARRSR FRQKKHVDNL TEQVDRLKVE NRELKNRLCV VTHHCQAAQS ETDRLILESI 120 VLQQQLAGLC QILNPMQLQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 53 | 57 | RKRRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028065855.1 | 3e-47 | basic leucine zipper 4-like | ||||
TrEMBL | A0A2G2ZRB5 | 1e-95 | A0A2G2ZRB5_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400012575 | 3e-63 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G49760.1 | 1e-24 | basic leucine-zipper 5 |