 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
CA03g24680 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
| Family |
C2H2 |
| Protein Properties |
Length: 285aa MW: 32777.8 Da PI: 9.5173 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| CA03g24680 | genome | PEP | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 12.1 | 0.00058 | 118 | 141 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23
++C++C+ksF+ L +H + H
CA03g24680 118 WRCGYCKKSFRAEKFLDQHFDNrH 141
58**********999999976655 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MKILRQIPAK NYSYILLPSF VLIIVFSSSS ISATPSLSPS DQGTEKHATS PEQDKSHVHE 60
VHCSRERSRA AWKVIEEYLM PFVEREKYEL PRQCRLHPSN DIFRDQEEHK IHFDLNEWRC 120
GYCKKSFRAE KFLDQHFDNR HSNLLDTVHS KCLADVCGAL HCDLVMEFKS KKTKCNPAAA 180
ARNRHLCEGL ADKCFPANES PSATRLHELF LRQFCDAHTC SGGRKPFSKG GKKHTNRFYF 240
AASVLTLMLL PLFYLIVYLY QKEMKRGTQE LKRIAKVGRK AKPS*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT014430 | 0.0 | BT014430.1 Lycopersicon esculentum clone 133748R, mRNA sequence. |
