PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA03g03880
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 120aa    MW: 13564.6 Da    PI: 10.5272
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA03g03880genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.11e-0549871254
                HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                RR  i  ++ +L+ l+P+     +k  s a++Le Av++I+ L
  CA03g03880 49 RRTIIGGKLKKLQGLVPNM----DKQTSYADMLEIAVQHIQTL 87
                78888889**********7....688***************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.81E-1049103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.73E-54992No hitNo description
Gene3DG3DSA:4.10.280.103.7E-950103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    Send to blast
MSWQPPSWKG VEKSKPPAVP SSKPNYFCAG PCEFRDFINS VSGPFKGMRR TIIGGKLKKL  60
QGLVPNMDKQ TSYADMLEIA VQHIQTLRDR VQRLNTEIDV RHQVNNSGMQ NRRKHLAED*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2G2Y2432e-39A0A2G2Y243_CAPAN; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA64552328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43140.29e-17bHLH family protein