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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g24850 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bZIP | ||||||||
Protein Properties | Length: 227aa MW: 26417.7 Da PI: 9.6489 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.2 | 2.6e-11 | 121 | 173 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 ++ rr+ +NRe+ArrsR RK++ +e+L++ v L+ N++L ++l ++ +++ CA02g24850 121 RKRRRMVSNRESARRSRMRKQKHLENLRNQVNRLKIGNRELMNRLRLITHQYQ 173 5779999*************************************999998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.9E-12 | 117 | 181 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.461 | 119 | 182 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.75E-11 | 121 | 172 | No hit | No description |
Pfam | PF00170 | 1.4E-8 | 121 | 173 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.7E-8 | 121 | 173 | No hit | No description |
CDD | cd14702 | 2.25E-17 | 122 | 173 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 124 | 139 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MLSTLSATTL SSDGLFSNSF AAFDGGFTPW ECIEPAFLFP RDVEEXXXXX XXEPVLSPKQ 60 SPPTEPVILN SDSGSDDSKP NSIHSSSGSD EPNRNNNNNS NRCLDERKRQ RTTSNRDIDE 120 RKRRRMVSNR ESARRSRMRK QKHLENLRNQ VNRLKIGNRE LMNRLRLITH QYQIFQCDNE 180 RLKTESAILG QRLEDIREIL RARQLQQQFN SYFAWPCSNY MEQRPH* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 124 | RKRQRTTSNRDIDERKRRR |
2 | 120 | 124 | RKRRR |
3 | 120 | 141 | RKRRRMVSNRESARRSRMRKQK |
4 | 133 | 140 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560923.1 | 1e-150 | PREDICTED: light-inducible protein CPRF2-like | ||||
TrEMBL | A0A2G3AB86 | 1e-158 | A0A2G3AB86_CAPAN; Uncharacterized protein | ||||
STRING | PGSC0003DMT400055214 | 1e-102 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2820 | 22 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 8e-30 | basic leucine-zipper 6 |