PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA02g17470 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 452aa MW: 49797 Da PI: 5.6311 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 16.8 | 1.2e-05 | 347 | 384 | 12 | 54 |
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+eYIk L CA02g17470 347 RKEKLGDRITALQQLVSPF-----GKTDTASVLHEAIEYIKFL 384 677888999*******998.....8****************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 11.992 | 335 | 384 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.31E-11 | 345 | 398 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 1.04E-5 | 345 | 388 | No hit | No description |
Gene3D | G3DSA:4.10.280.10 | 9.8E-9 | 349 | 391 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0042631 | Biological Process | cellular response to water deprivation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0071215 | Biological Process | cellular response to abscisic acid stimulus | ||||
GO:0071472 | Biological Process | cellular response to salt stress | ||||
GO:2000214 | Biological Process | regulation of proline metabolic process | ||||
GO:2000377 | Biological Process | regulation of reactive oxygen species metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence Send to blast |
MADEYQAGVC GGNWWNSSRS IFGSSLCASS VPLGNSNFAW PNDHLLDMKS SCRSNDESGN 60 SDESVVLQEL PKHDSTLQIL GIGLNSSSTS DNWNHTLIHG NDKSESSYPS ILLQDLNSSM 120 NYQQESGVDC SSNSFKQDFT LGMNHPITSS TNTDDQSTTM ISSTFPMDSS FSNYTSSLLQ 180 TLFENDPPNP PQQQQPQLQQ SMFATNNNQP VSFPTSSLNY RPDLNDFSPS LPKFPNSLMR 240 PSLALPKQTP SDFPNYSINA TAPLYNTSSA TSLNNMRGNL LPSMHQQLLQ SPTFNEKSSV 300 PNRTSKSNVE ELRESSSRVA KKSGNNEPTL KRARIETPSP LPSFKVRKEK LGDRITALQQ 360 LVSPFGKTDT ASVLHEAIEY IKFLHDQVNV LSTPYLKNGS TSQQQQIVDK VKEQDLRSRG 420 LCLVPISSTF PVATETTSDF WTPNFGGTTF R* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016560033.1 | 0.0 | PREDICTED: transcription factor bHLH112 | ||||
TrEMBL | A0A2G3A8Q1 | 0.0 | A0A2G3A8Q1_CAPAN; Transcription factor | ||||
STRING | Solyc02g079760.2.1 | 0.0 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA860 | 24 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61660.1 | 5e-58 | bHLH family protein |