PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

CA02g04240

Organism

Capsicum annuum

Taxonomic ID

4072

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

VOZ

Protein Properties

Length: 334aa MW: 37384.3 Da PI: 6.2614

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
CA02g04240	genome	PEP	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	416.1	6.4e-128	53	272	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlq...dycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaaelf 96 pppsaflgpkcalwdc+rpa gs+w+q dycs +ha+la neg +g pv+rp g++lkd+llf+alsak+qgk+vg+pec+gaatakspwna+elf CA02g04240 53 PPPSAFLGPKCALWDCPRPAMGSDWCQkshDYCSDYHAALAPNEGFLGRPPVVRPMGVGLKDSLLFQALSAKAQGKDVGVPECKGAATAKSPWNAPELF 151 89*********************976668**************************************************************** PP VOZ 97 dlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvdekks 195 dl+++egetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqvm+++gglkrsyymdpqp++++ewhlyeyein++da alyrlelklvd+kks CA02g04240 152 DLEVVEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVMNDYGGLKRSYYMDPQPMKNLEWHLYEYEINKYDAWALYRLELKLVDGKKS 250 *********************************************************************************************** PP VOZ 196 akgkvskdsladlqkklgrlta 217 +kgkv+k+s+adlqk++grlta CA02g04240 251 PKGKVTKESVADLQKRMGRLTA 272 ******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence Send to blast
MPSVDNNAGI NNLGVATQLD YHSFDPQQDF DQFGFDALNL CLEDDLPPIQ ISPPPSAFLG 60 PKCALWDCPR PAMGSDWCQK SHDYCSDYHA ALAPNEGFLG RPPVVRPMGV GLKDSLLFQA 120 LSAKAQGKDV GVPECKGAAT AKSPWNAPEL FDLEVVEGET IREWLFFDKP RRAFESGNRK 180 QRSLPDYNGR GWHESRKQVM NDYGGLKRSY YMDPQPMKNL EWHLYEYEIN KYDAWALYRL 240 ELKLVDGKKS PKGKVTKESV ADLQKRMGRL TAEFPLENKR IVKGRAKSNT KDVATNVHAA 300 PNQTVPVIEG FDYVAGAPFP DYLVDNLGGY YIT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975514	0.0	HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016559800.1	0.0	PREDICTED: transcription factor VOZ1-like
Swissprot	Q9SGQ0	1e-142	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A1U8FM45	0.0	A0A1U8FM45_CAPAN; transcription factor VOZ1-like
STRING	PGSC0003DMT400081241	0.0	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA2818	24	54

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	1e-142	vascular plant one zinc finger protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]