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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | CA00g91420 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ZF-HD | ||||||||
Protein Properties | Length: 177aa MW: 19946.4 Da PI: 8.2471 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 69.7 | 4.9e-22 | 9 | 64 | 3 | 58 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 v+Y eC++N Aa+ gh++DGCgEf+p+ ++ t++++ aAC CHRnFHR+ ++ CA00g91420 9 VVKYLECRHNYAARFNGHVLDGCGEFCPAGAHDDTPESFISAACHCHRNFHRKVEV 64 589**************************8888********************865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD125774 | 6.0E-11 | 3 | 72 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Pfam | PF04770 | 2.0E-19 | 10 | 63 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
TIGRFAMs | TIGR01566 | 7.1E-20 | 11 | 61 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
PROSITE profile | PS51523 | 19.985 | 12 | 62 | IPR006456 | ZF-HD homeobox protein, Cys/His-rich dimerisation domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence Send to blast |
MTSNNKHFVV KYLECRHNYA ARFNGHVLDG CGEFCPAGAH DDTPESFISA ACHCHRNFHR 60 KVEVEVEAGV ELPIFSINHP NNDAPLAIID GPPISPQRQY STRPEQPHHR HQRFYKNNIV 120 IIQPQGAEIE MGGGEVEVTA QSNFKRNYNN ASSSVRMKLK PNQKERVLAF AKDVMR* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010314609.1 | 4e-57 | zinc-finger homeodomain protein 4-like | ||||
TrEMBL | A0A2G2XU75 | 1e-129 | A0A2G2XU75_CAPAN; Uncharacterized protein | ||||
STRING | Solyc01g103830.1.1 | 3e-56 | (Solanum lycopersicum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10889 | 11 | 18 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14440.2 | 1e-16 | homeobox protein 31 |