PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CA00g44100
Organism
Capsicum annuum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family Trihelix
Protein Properties Length: 356aa    MW: 40295.3 Da    PI: 10.2571
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CA00g44100genomePEPView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix45.91.4e-1473163186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  +++Liea   +  +l++g+l+ ++We+v++++     + ++  r+  qCk++++ l+k+yk +k+  ++   +  st+p+f++l+
  CA00g44100  73 CWSEAATHTLIEAWGGKYVELNKGSLRHQHWEAVADAVnalhgHTKKQYRTEMQCKNRIDTLKKKYKIEKAKVSESPGRYFSTWPFFSSLN 163
                 7*************************************999987777889*********************99998888889******997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.1E-2371165No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MLRRHNHTHN PPSPSPISSP NPNSHPXXXX XXXXXXXXXX XXXXXXXXPP EAALTVTPAV  60
SSRTAAFPAR EDCWSEAATH TLIEAWGGKY VELNKGSLRH QHWEAVADAV NALHGHTKKQ  120
YRTEMQCKNR IDTLKKKYKI EKAKVSESPG RYFSTWPFFS SLNALLGPVM PPHQWRAPPR  180
PEMPPLQWRP PPPDTSPLEW RTPSQLPPPL LGVPVASRTK RPGATIDYTV SRRNFSAMAA  240
AAAGSSDDSE EEEEEKEESE TSSLAASAMA NAASKSKRKR NGGLVEGYKM LAEAVGKFSE  300
TYERIEKAKQ RQMVELEKQR MQFTKDLEIQ RMKLMMESQV HLEKLKRSNK QFRRW*
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016579142.11e-168PREDICTED: trihelix transcription factor ASIL2-like, partial
TrEMBLA0A2G2Y0A70.0A0A2G2Y0A7_CAPAN; Uncharacterized protein
STRINGPGSC0003DMT4000526071e-139(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13182370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.13e-41sequence-specific DNA binding transcription factors