PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_48444

Common Name

KK1_049501

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Trihelix

Protein Properties

Length: 272aa MW: 30264.2 Da PI: 5.1201

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_48444	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	58.9	1.3e-18	4	63	27	86
trihelix 27 kkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +p+W+ vs++++++g++r+p+qC+++w+nl+++ykkike+e++ ++e++s + + ++l+ C.cajan_48444 4 SEPKWALVSAYCKKHGVNREPVQCRKRWSNLAGDYKKIKEWESQVRDETESFWLMRNDLR 63 589*****************************************9999999998888875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	1.8E-9	6	58	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence Send to blast
FGSSEPKWAL VSAYCKKHGV NREPVQCRKR WSNLAGDYKK IKEWESQVRD ETESFWLMRN 60 DLRRERKLPG YFDREVYNIL DSPSTAAAAA AETPVATSAA AVGEEVHLYD SNRRVGSEDG 120 LFSDCEKDEV LLLASAKDVP APVPISDMMA LLFNLCNGFS LAEKGLVDII VGVGIVWCTT 180 NEKRPTPNPE MGSTSQGAAR KRKRLPTDGE EESFQSQLID VLEKNGKMLR DQLEAQNMNS 240 QLDRQQQKDT ASNIVAVLDK LADALGRIAD KL

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_48444

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020209426.1	1e-167	trihelix transcription factor ASR3, partial
TrEMBL	A0A151UIR4	0.0	A0A151UIR4_CAJCA; Uncharacterized protein (Fragment)
STRING	GLYMA08G28880.1	1e-142	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2165	33	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-66	Trihelix family protein