PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_47507
Common NameKK1_049781
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 224aa    MW: 25635 Da    PI: 6.7817
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_47507genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.52.6e-17550348
                     SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +WT+eEd ll+++++q+G g W++++   g++R++k+c++rw++yl
    C.cajan_47507  5 AWTEEEDHLLKKCIQQYGEGKWHRVPLLAGLNRCRKSCRLRWLNYL 50
                     7*******************************************97 PP
2Myb_DNA-binding49.21.2e-1556100147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg++ +eE e +++++k+lG++ W++Ia +++ gRt++++k++w+ +
    C.cajan_47507  56 RGNFAEEEVEMIIKLHKLLGNR-WSLIAGRLP-GRTANDVKNYWNCH 100
                      8999******************.*********.***********977 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.777150IPR017930Myb domain
SMARTSM007175.8E-13252IPR001005SANT/Myb domain
SuperFamilySSF466897.7E-28597IPR009057Homeodomain-like
PfamPF002491.1E-15550IPR001005SANT/Myb domain
CDDcd001671.75E-10550No hitNo description
Gene3DG3DSA:1.10.10.602.1E-21557IPR009057Homeodomain-like
PROSITE profilePS5129425.11651105IPR017930Myb domain
SMARTSM007172.8E-1555103IPR001005SANT/Myb domain
PfamPF002491.9E-135698IPR001005SANT/Myb domain
CDDcd001678.18E-1158101No hitNo description
Gene3DG3DSA:1.10.10.602.2E-2458105IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    Send to blast
MGGVAWTEEE DHLLKKCIQQ YGEGKWHRVP LLAGLNRCRK SCRLRWLNYL RPNIKRGNFA  60
EEEVEMIIKL HKLLGNRWSL IAGRLPGRTA NDVKNYWNCH LSKKLNVLEA EDTQLARDAQ  120
VIRPQPRNIG SGSGKRRDQG QSPSEKGVQQ ESSMSSLTFD LEGHNHMLQS QQDNIYACLD  180
QQGSIISELS MDFQLEGFEA MMNGEGSSSQ WDWGDLLLDM DLYK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1a5j_A2e-22610710110B-MYB
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator, when associated with BHLH002/EGL3/MYC146, BHLH012/MYC1, or BHLH042/TT8. {ECO:0000269|PubMed:15361138}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_47507
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP2381171e-134KP238117.1 Lablab purpureus R2R3-MYB-like protein (r2r3-myb like) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020209552.11e-166transcription factor MYB113
SwissprotQ9FNV98e-56MY113_ARATH; Transcription factor MYB113
TrEMBLA0A151UE371e-165A0A151UE37_CAJCA; Transcription factor MYB113 family
STRINGXP_007140451.11e-145(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3134817
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66370.12e-58myb domain protein 113
Publications ? help Back to Top
  1. Li T, et al.
    Jasmonic acid enhancement of anthocyanin accumulation is dependent on phytochrome A signaling pathway under far-red light in Arabidopsis.
    Biochem. Biophys. Res. Commun., 2014. 454(1): p. 78-83
    [PMID:25450360]
  2. Mondal SK,Roy S
    Genome-wide sequential, evolutionary, organizational and expression analyses of phenylpropanoid biosynthesis associated MYB domain transcription factors in Arabidopsis.
    J. Biomol. Struct. Dyn., 2018. 36(6): p. 1577-1601
    [PMID:28490275]