PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_47360
Common NameKK1_049486
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family DBB
Protein Properties Length: 193aa    MW: 21546.7 Da    PI: 6.2266
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_47360genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.42.5e-07433534
       zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                    C+ +e+  ++lfC  ++  lC  C  ++H
  C.cajan_47360  4 LCDVCENAAAILFCAADEAALCSACDHKIH 33
                   7*******9*******************99 PP
2zf-B_box26.71.1e-085392338
       zf-B_box  3 erkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                    ++C+ +e+ ++ ++Ce +++ lC +C +  H g    H+
  C.cajan_47360 53 VPRCDICENAPAFFYCEIDGSSLCLQCDMIVHVGgkrtHE 92
                   689**************************99966666776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501199.798147IPR000315B-box-type zinc finger
SMARTSM003364.0E-6147IPR000315B-box-type zinc finger
PfamPF006437.3E-6334IPR000315B-box-type zinc finger
CDDcd000212.89E-5345No hitNo description
SMARTSM003362.2E-105196IPR000315B-box-type zinc finger
PROSITE profilePS501199.1295196IPR000315B-box-type zinc finger
PfamPF006431.4E-65392IPR000315B-box-type zinc finger
CDDcd000217.80E-75493No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010100Biological Processnegative regulation of photomorphogenesis
GO:0070370Biological Processcellular heat acclimation
GO:0071483Biological Processcellular response to blue light
GO:0005634Cellular Componentnucleus
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    Send to blast
MRTLCDVCEN AAAILFCAAD EAALCSACDH KIHMCNKLAS RHVRVGLADP TDVPRCDICE  60
NAPAFFYCEI DGSSLCLQCD MIVHVGGKRT HERYLVLRQR VEFPGDKPVQ MEELGLQPLD  120
QNELSKDENQ SLKLKTRDCQ QNQSVSPVPR QENNIDGHGK IDKKLIDLNT RPLRLNGPAP  180
NNQVIVFSFS ILS
Functional Description ? help Back to Top
Source Description
UniProtActs as negative regulator of seedling photomorphogenesis. {ECO:0000269|PubMed:18540109}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_47360
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0922060.0BT092206.1 Soybean clone JCVI-FLGm-10I4 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020209413.11e-134B-box zinc finger protein 18
RefseqXP_020209414.11e-134B-box zinc finger protein 18
SwissprotC0SVM52e-74BBX19_ARATH; B-box zinc finger protein 19
TrEMBLA0A151UE171e-140A0A151UE17_CAJCA; Putative salt tolerance-like protein At1g78600 family
STRINGGLYMA11G11850.21e-121(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF27343370
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38960.18e-77DBB family protein