PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_43785
Common NameKK1_046380
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 325aa    MW: 36849.5 Da    PI: 6.258
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_43785genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.96.7e-52141391128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                    lppGfrF Ptdeel+v+yL++kv+g++++l  +i+evd+yk++Pw Lp k+  +ekewyfFs+rd+ky++g+r+nr++ sgyWkatg+dk +++ +
  C.cajan_43785  14 LPPGFRFYPTDEELLVQYLCRKVAGHHFSL-PIIAEVDLYKFDPWVLPGKAVFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITT-E 107
                    79**************************99.88***************7777899*************************************99.9 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                    g+++g+kk Lvfy g+apkg+kt+W+mheyrl
  C.cajan_43785 108 GRKIGIKKALVFYIGKAPKGSKTNWIMHEYRL 139
                    99****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.09E-6510165IPR003441NAC domain
PROSITE profilePS5100560.35914164IPR003441NAC domain
PfamPF023651.9E-2615139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MRVPERDPLA QLSLPPGFRF YPTDEELLVQ YLCRKVAGHH FSLPIIAEVD LYKFDPWVLP  60
GKAVFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKVITTEGRK IGIKKALVFY  120
IGKAPKGSKT NWIMHEYRLL DSSRKNNLGT TKLDDWVLCR IYKKNSSGQK VGANLRDKEC  180
NNGSSPYSSS HIDDMLESLP EIDDQCYMLP QDEKFGFQNM GTEIFSDWVN PTDMDSTSEF  240
GSGYQTQGIM NYNCNDLFVP SMSPPFGHVD FLVGTPTVEE FQSGMRTQRV NGAECFQPNT  300
NTRLLPDSAD PFGFGYLGHG FESRD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-10411704171NO APICAL MERISTEM PROTEIN
1ut4_B1e-10411704171NO APICAL MERISTEM PROTEIN
1ut7_A1e-10411704171NO APICAL MERISTEM PROTEIN
1ut7_B1e-10411704171NO APICAL MERISTEM PROTEIN
4dul_A1e-10411704171NAC domain-containing protein 19
4dul_B1e-10411704171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_43785
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankDQ0287710.0DQ028771.1 Glycine max NAC domain protein NAC3 (NAC3) mRNA, complete cds.
GenBankKF6573040.0KF657304.1 Glycine max NAC transcription factor (SNAC23) mRNA, complete cds.
GenBankKT0312130.0KT031213.1 Glycine max clone HN_CCL_132 NAC transcription factor (Glyma06g38410.1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020208089.10.0NAC domain-containing protein 72
SwissprotA0A3Q7HH641e-119JA2L_SOLLC; NAC domain-containing protein JA2L
TrEMBLA0A151QRD50.0A0A151QRD5_CAJCA; NAC domain-containing protein 55
STRINGGLYMA12G22880.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF44293360
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-114NAC domain containing protein 3
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]