PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_43444

Common Name

KK1_043380

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Trihelix

Protein Properties

Length: 932aa MW: 104713 Da PI: 8.0944

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_43444	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.8	1.6e-09	173	228	21	76
trihelix 21 lrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 ++rgk ++ + +ev++++r++g++r +k+ kw+n+ ++++k+ e+e++++ e+ C.cajan_43444 173 ISRGKTRADKDREVAEFLRRHGVNRDAKTAGTKWDNMLGEFRKVYEWERGGEREQI 228 45789999999**************************************9965544 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF56112	3.42E-16	786	911	IPR011009	Protein kinase-like domain
CDD	cd00180	6.06E-12	786	912	No hit	No description
Gene3D	G3DSA:1.10.510.10	2.3E-8	787	916	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 932 aa Download sequence Send to blast
MGDKGDTSKK QQQPPQQQQP QSLHHHQQQQ QTQQQQPQTQ QISSSPQAPR EELPPITEVR 60 SIHHQQQQTP VVVVTGAPPF ISSPLYVSSG ASSSPFDPQF ESLNPKRPRY SGQWKQLLPS 120 PSAKQKQKGK YVSPVWKPNE MLWLARAWKE QYQGGGGGSE SSSRAEQQGE LGISRGKTRA 180 DKDREVAEFL RRHGVNRDAK TAGTKWDNML GEFRKVYEWE RGGEREQIGK SYFRLSQYER 240 KLHRLPASFD EDVFEELSQF MGSRMRSSHG RAGSSFVSGD EARSALAATR ALLPPPRSLK 300 DDEATPHSGR TKQLALTSGG EPFFQGSRGG LLGLESLLDV SGSSSSSREP LRRMGKIRMT 360 WEESVSLWAE EGEVHRGRVK LQSSSFLNAD ELTCFDDAMV PCPMEYFEDG PLKGFSVDRF 420 VSGQQVKVFG RRKASPASAS SGLAERVQLP SKALPIRSIG TLDFRDPTEY YMECLLRASS 480 PQTLPTLFDL RRHLQDPPPE ELRFPLRREV YDDLPQGKEL FFTSATEPLD CRTLMHDIVG 540 PIIRTHPSPT IPTSRDSFIP LWDDCVNRVI ARFCPEEMKI IRKPSLKDTA KTLIQDQWPN 600 VTGFVNNFCL WRGEETDRLK ESQPDPSSTL VGKLLWSYMD LPYVLGYYAV ANTVTFCALS 660 RSHEGVNLIN RTDLLELNLS NPMERLKCLV PCFRIGVLLA MLSKHCAKGG IYSDFERVSY 720 GNGVVTELTP NTCTRVFWEK RKWMAVKEVY EILDHRIPHA EILVGSSEGE LTLSFRPRGC 780 RLRPGSFEEL VEALKCVTKA LVALHDLSFM HRDLKWEKVM RRVDGEEWFV CGFEEAGGAP 840 ELKGHVAGAR EGHAPEMERG LHGVKVDVWG VGYLIRTCGL GGVPKMLREL QGRCMEQSPE 900 QRPTAADCYH HLLQMQSSLA AAAAATGGVI MM

Sequence ? help Back to Top

Protein Sequence Length: 932 aa Download sequence Send to blast

MGDKGDTSKK QQQPPQQQQP QSLHHHQQQQ QTQQQQPQTQ QISSSPQAPR EELPPITEVR  60
SIHHQQQQTP VVVVTGAPPF ISSPLYVSSG ASSSPFDPQF ESLNPKRPRY SGQWKQLLPS  120
PSAKQKQKGK YVSPVWKPNE MLWLARAWKE QYQGGGGGSE SSSRAEQQGE LGISRGKTRA  180
DKDREVAEFL RRHGVNRDAK TAGTKWDNML GEFRKVYEWE RGGEREQIGK SYFRLSQYER  240
KLHRLPASFD EDVFEELSQF MGSRMRSSHG RAGSSFVSGD EARSALAATR ALLPPPRSLK  300
DDEATPHSGR TKQLALTSGG EPFFQGSRGG LLGLESLLDV SGSSSSSREP LRRMGKIRMT  360
WEESVSLWAE EGEVHRGRVK LQSSSFLNAD ELTCFDDAMV PCPMEYFEDG PLKGFSVDRF  420
VSGQQVKVFG RRKASPASAS SGLAERVQLP SKALPIRSIG TLDFRDPTEY YMECLLRASS  480
PQTLPTLFDL RRHLQDPPPE ELRFPLRREV YDDLPQGKEL FFTSATEPLD CRTLMHDIVG  540
PIIRTHPSPT IPTSRDSFIP LWDDCVNRVI ARFCPEEMKI IRKPSLKDTA KTLIQDQWPN  600
VTGFVNNFCL WRGEETDRLK ESQPDPSSTL VGKLLWSYMD LPYVLGYYAV ANTVTFCALS  660
RSHEGVNLIN RTDLLELNLS NPMERLKCLV PCFRIGVLLA MLSKHCAKGG IYSDFERVSY  720
GNGVVTELTP NTCTRVFWEK RKWMAVKEVY EILDHRIPHA EILVGSSEGE LTLSFRPRGC  780
RLRPGSFEEL VEALKCVTKA LVALHDLSFM HRDLKWEKVM RRVDGEEWFV CGFEEAGGAP  840
ELKGHVAGAR EGHAPEMERG LHGVKVDVWG VGYLIRTCGL GGVPKMLREL QGRCMEQSPE  900
QRPTAADCYH HLLQMQSSLA AAAAATGGVI MM

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_43444

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020206203.1	0.0	uncharacterized protein LOC109791325
TrEMBL	A0A151QZ37	0.0	A0A151QZ37_CAJCA; Uncharacterized protein
STRING	XP_007152366.1	0.0	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF11857	28	31

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	1e-07	Trihelix family protein