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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_43418 | ||||||||
Common Name | KK1_046139 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | GeBP | ||||||||
Protein Properties | Length: 167aa MW: 19018.9 Da PI: 10.0774 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 77.8 | 1.7e-24 | 1 | 79 | 19 | 97 |
DUF573 19 lidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 + +f ++tg +p+++ d f++ +k+ +++ +s +ql eKirrLKkKf+ ++++ k+g++p+fsk+hd+ +f+lsk++W C.cajan_43418 1 MAEFISSTGNDPYKHADSFHDSIKNMLHVAASINQLKEKIRRLKKKFEANSRRGKNGDDPHFSKPHDSTMFHLSKMVWA 79 678999************************************************************************5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04504 | 1.9E-21 | 1 | 78 | IPR007592 | Protein of unknown function DUF573 |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MAEFISSTGN DPYKHADSFH DSIKNMLHVA ASINQLKEKI RRLKKKFEAN SRRGKNGDDP 60 HFSKPHDSTM FHLSKMVWAV KPRPSEKQLV TVKSLMGNDL DSLYLEIAGM KELGEDEMKK 120 GLALIGESKR KELEGRWSQL RLAQLQLVSD RSQLTGEIVK LIHEALH |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_43418 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020207948.1 | 1e-121 | probable transcription factor At1g61730 | ||||
TrEMBL | A0A151QRX2 | 1e-119 | A0A151QRX2_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA05G12406.1 | 1e-56 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1831 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25210.1 | 3e-14 | DNA-binding storekeeper protein-related transcriptional regulator |