PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42665
Common NameKK1_042546
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family bZIP
Protein Properties Length: 295aa    MW: 32277.6 Da    PI: 5.6881
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42665genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.92.2e-13131184356
                    XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                    ++kr rrk +NRe+ArrsR+RK+a ++ Le  v+ L  eN  L k+l   +++ 
  C.cajan_42665 131 DIKRLRRKFSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQF 184
                    58*****************************************97776666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.9E-13129193IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.932131194IPR004827Basic-leucine zipper domain
PfamPF001709.0E-11132180IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.1E-8133169No hitNo description
SuperFamilySSF579591.03E-10133183No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
CDDcd147025.84E-8147185No hitNo description
Gene3DG3DSA:1.20.5.102.1E-4170203No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MTAAHIDDFK WIASILDPEI SNDDVKPCKS DPFTSHLNQA FQNLDAVTAF STTCGGTGVT  60
DDTFVCSQNL TPLQSTISAT IDSQSSICVG SPVSANKPNS TENEKVKGNT TTSGSSRDPS  120
DEDEAGTNAI DIKRLRRKFS NRESARRSRR RKQAHLADLE WQVERLRLEN ANLFKQLTDA  180
SQQFREADTN NRVLKSDVEA LRAKVKLAED MVTRGSLPFS NQLHQNQCQL GTPPQLNTNS  240
TLRGMAHVSP TITIQGNNNN DASYGAAGIT VSSLDIPCND FNNDNVVSSM TTLWP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135151RRKFSNRESARRSRRRK
2145152RRSRRRKQ
3147152SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that binds to the DNA specific sequence 5'-TGAGTCA-3' found in seed storage protein gene promoters. {ECO:0000269|PubMed:11133985}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42665
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205676.10.0bZIP transcription factor RISBZ4 isoform X2
SwissprotQ6H5001e-48RSBZ4_ORYSJ; bZIP transcription factor RISBZ4
TrEMBLA0A151R1A30.0A0A151R1A3_CAJCA; Regulatory protein opaque-2
STRINGGLYMA17G24602.11e-131(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.19e-39basic leucine zipper 9
Publications ? help Back to Top
  1. Onodera Y,Suzuki A,Wu CY,Washida H,Takaiwa F
    A rice functional transcriptional activator, RISBZ1, responsible for endosperm-specific expression of storage protein genes through GCN4 motif.
    J. Biol. Chem., 2001. 276(17): p. 14139-52
    [PMID:11133985]
  2. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]