PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_42500
Common NameKK1_044673
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 654aa    MW: 71086.2 Da    PI: 7.6507
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_42500genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.61e-083864231954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LAk++gL  +qV++WF N R +
  C.cajan_42500 386 FEHflHPYPKDSDKVMLAKQTGLARSQVSNWFINARVR 423
                    664459******************************88 PP
2BELL121.82.8e-39250321172
           BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    +rqelq+kk+kL+++l+eV++rY+qy++q+q+v+ssFe++ag+g+ak Yt+lAlk+iS++FrcLkdai+ qi
  C.cajan_42500 250 QRQELQMKKSKLVTMLDEVEQRYRQYHHQMQIVVSSFEQAAGYGAAKCYTALALKTISKQFRCLKDAISAQI 321
                    69********************************************************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005744.4E-70176319IPR006563POX domain
PfamPF075261.7E-50181318IPR006563POX domain
PROSITE profilePS5007111.726364427IPR001356Homeobox domain
SMARTSM003891.3E-8367431IPR001356Homeobox domain
CDDcd000862.02E-11367428No hitNo description
SuperFamilySSF466892.61E-16368434IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.1E-27370433IPR009057Homeodomain-like
PfamPF059201.6E-17384423IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 654 aa     Download sequence    Send to blast
MATYFHGSAS EIQPSADGLQ TLYLMNPSYV PYPDAPHHPT LLVNPNALGH ASLPHAPPVS  60
PSQQQQHHVI HGVTNILGSA SSEDHTRPSL FGENIAAFHG FSAAPRVQYN LWGSVADQPA  120
TPSSSSGGGG FRRPSQQGLS LSLSSQQTAY RTVSGEIDVT GHGLVGGIGN SPASASASTG  180
VILGSKYLKS AQELLEEVVN VGKGIYKEEK FAEKKANRES TNSGAGGGDG SSGGGENSAG  240
KQVVELSTAQ RQELQMKKSK LVTMLDEVEQ RYRQYHHQMQ IVVSSFEQAA GYGAAKCYTA  300
LALKTISKQF RCLKDAISAQ IKATSKTLGE DDCLGVKVEG SRLRFVDHHL RQQRALQQLG  360
MIQPNAWRPQ RGLPERAVSI LRAWLFEHFL HPYPKDSDKV MLAKQTGLAR SQVSNWFINA  420
RVRLWKPMVE EMYLEEIKDH EQTNESFNNQ NTSPTEFSTN SSVGGSLQSH SGFHLAGCSD  480
MQRSPNKPRS SEILQNSPSS ILSVDMEMKH GDHANTRESN TRFGIERHNK DGYPLMNGNA  540
NNGGGFGAFT MDDIGSRFNV TTEQLASRLH GNGVSLTLGL PHDENLSISG TQHGFLSQNN  600
IPLGRRLEMG TNGNEFCAIN TTPPPSSHSG TTYESIDIQN RKRFVAQLLP DFVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrs_A3e-16373430158Homeobox protein Meis1
4xrs_B3e-16373430158Homeobox protein Meis1
5bng_A4e-16373431159Homeobox protein Meis2
5bng_B4e-16373431159Homeobox protein Meis2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_42500
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020207111.10.0BEL1-like homeodomain protein 1 isoform X1
SwissprotQ9SJ561e-150BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A151QVV50.0A0A151QVV5_CAJCA; BEL1-like homeodomain protein 1
STRINGGLYMA13G38910.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-133BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]