PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_41497
Common NameKK1_040868
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 300aa    MW: 33856.5 Da    PI: 5.4663
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_41497genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix25.92.5e-082685261
       trihelix  2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkry 61
                   W+  e l L++ +  +e + +++ +  ++W  +++++++  ++rs  qC+ kw+ l  +y
  C.cajan_41497 26 WSVTEALILVNEVAAVEADCSAALSSYQQWNIIAENCAALDVRRSLAQCRRKWRALLSDY 85
                   999****************************************************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.8062682IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009506Cellular Componentplasmodesma
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MDENDDDVSH DGSGSRRTRS QAAPDWSVTE ALILVNEVAA VEADCSAALS SYQQWNIIAE  60
NCAALDVRRS LAQCRRKWRA LLSDYDGGLP GFDRELFEAV GRVVRAREER GLVDPESDNE  120
AGNEARDATV EIGSKRRGQR SKSSHQVKKP KKCLEQSHDE WPEDDHSEEE YLKDFLKSRP  180
KLKCTAERPP KHLVMQSKSH GKVELHENHH IERPKPMNTE KITISREENE ETLTLKLQEL  240
AVEIEAIATE SASDYKGGGS QNVEDSHTDF TRRQGDKLIS SLGNFSHTLK HLCDLLQECK
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_41497
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020204404.10.0uncharacterized protein LOC109789780
TrEMBLA0A151R6B10.0A0A151R6B1_CAJCA; Uncharacterized protein
STRINGGLYMA17G27601.11e-159(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67322633
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.13e-34sequence-specific DNA binding transcription factors