PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40755
Common NameKK1_044025
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 296aa    MW: 34348.9 Da    PI: 8.9138
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40755genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM161.53.2e-50221492128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.. 95 
                     pGfrFhPtdeelv +yL++kve+k+l++ e ik++diyk++PwdLpk+ + +ekewyfF+ r +ky+++ r+nr+t sg+Wkatg dk++++   
  C.cajan_40755  22 LPGFRFHPTDEELVGFYLRRKVEKKPLRI-ELIKQIDIYKYDPWDLPKASSVGEKEWYFFCIRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVke 116
                    69***************************.89***************8888899**************************************9743 PP

            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +  +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  C.cajan_40755 117 PHDCIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 149
                    4445***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.15E-5420177IPR003441NAC domain
PROSITE profilePS5100553.26521178IPR003441NAC domain
PfamPF023653.6E-2523149IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MEVTKLHSSD DDDKKEEDEV VLPGFRFHPT DEELVGFYLR RKVEKKPLRI ELIKQIDIYK  60
YDPWDLPKAS SVGEKEWYFF CIRGRKYRNS IRPNRVTGSG FWKATGIDKP IYCVKEPHDC  120
IGLKKSLVYY RGSAGKGTKT DWMMHEFRLP PNGKTINNPQ PNHLQEAEVW TLCRIFKRVP  180
SFKRYTPNLK DSAMTKAIIN PTNSSISKTC SLESDNGKPY LTFTNSPLIQ QNQTKAHVDE  240
RSHLFLAQPP TSFSYSTFWN PQSADFGNEN WDDLTSVVQF AIDPSRVSDC KEFNRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-482318419171NO APICAL MERISTEM PROTEIN
1ut4_B1e-482318419171NO APICAL MERISTEM PROTEIN
1ut7_A1e-482318419171NO APICAL MERISTEM PROTEIN
1ut7_B1e-482318419171NO APICAL MERISTEM PROTEIN
3swm_A2e-482318422174NAC domain-containing protein 19
3swm_B2e-482318422174NAC domain-containing protein 19
3swm_C2e-482318422174NAC domain-containing protein 19
3swm_D2e-482318422174NAC domain-containing protein 19
3swp_A2e-482318422174NAC domain-containing protein 19
3swp_B2e-482318422174NAC domain-containing protein 19
3swp_C2e-482318422174NAC domain-containing protein 19
3swp_D2e-482318422174NAC domain-containing protein 19
4dul_A1e-482318419171NAC domain-containing protein 19
4dul_B1e-482318419171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40755
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0955300.0BT095530.1 Soybean clone JCVI-FLGm-15A17 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125791.10.0transcription factor JUNGBRUNNEN 1 isoform X1
SwissprotQ9SK553e-95NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A151QX750.0A0A151QX75_CAJCA; NAC domain-containing protein 42
STRINGXP_007141427.11e-175(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-94NAC domain containing protein 42
Publications ? help Back to Top
  1. Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
    JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
    Plant Signal Behav, 2016. 11(6): p. e1181245
    [PMID:27159137]
  2. Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
    Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
    Nat Plants, 2016. 2: p. 16013
    [PMID:27249348]
  3. Shahnejat-Bushehri S, et al.
    Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
    Front Plant Sci, 2017. 8: p. 214
    [PMID:28326087]
  4. Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
    Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
    Plant J., 2017. 92(6): p. 1106-1120
    [PMID:29032592]
  5. Ebrahimian-Motlagh S, et al.
    JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
    Front Plant Sci, 2017. 8: p. 2118
    [PMID:29326734]