![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | C.cajan_40644 | ||||||||
Common Name | KK1_044305 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 183aa MW: 20843.8 Da PI: 8.3026 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 86.5 | 2.4e-27 | 103 | 161 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +dDgy+WrKYG+K+vk++ + r+YY+C+s gC vkk+ver+++d ++v++tYeg Hnhe C.cajan_40644 103 MDDGYKWRKYGKKSVKSNCNLRNYYKCSSGGCIVKKRVERDRDDSSYVITTYEGVHNHE 161 59********************************************************8 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 2.4E-30 | 90 | 163 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.36E-26 | 95 | 163 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 28.988 | 98 | 163 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.1E-28 | 103 | 162 | IPR003657 | WRKY domain |
Pfam | PF03106 | 4.4E-21 | 104 | 161 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 183 aa Download sequence Send to blast |
MDFYFGNNPH PYPNYAHNNA NFFDPSSPQI ALSDYLMLDD YVDHHQESRS SQSTTESSEK 60 ATFSSDATHH GATSKNNKKC KNGNKAGVGP RIAFRTKSEL EIMDDGYKWR KYGKKSVKSN 120 CNLRNYYKCS SGGCIVKKRV ERDRDDSSYV ITTYEGVHNH ESPFTTYYSP ISFIHSDAFT 180 STQ |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1wj2_A | 1e-22 | 93 | 163 | 7 | 77 | Probable WRKY transcription factor 4 |
2lex_A | 1e-22 | 93 | 163 | 7 | 77 | Probable WRKY transcription factor 4 |
Search in ModeBase |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | C.cajan_40644 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | BT094910 | 1e-116 | BT094910.1 Soybean clone JCVI-FLGm-6M4 unknown mRNA. | |||
GenBank | BT095701 | 1e-116 | BT095701.1 Soybean clone JCVI-FLGm-15I9 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020206865.1 | 1e-121 | probable WRKY transcription factor 51 | ||||
TrEMBL | A0A151QWI8 | 1e-135 | A0A151QWI8_CAJCA; Putative WRKY transcription factor 51 | ||||
STRING | GLYMA05G31800.1 | 9e-90 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1120 | 34 | 110 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G64810.1 | 3e-41 | WRKY DNA-binding protein 51 |