PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_40311
Common NameKK1_042360
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 572aa    MW: 64046.1 Da    PI: 4.8769
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_40311genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.61e-52211471127
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    lp GfrF+Ptdeel+++yL+ k++g+  ++  vi+evd++k+ePwdLp +  v++++ ew+fF+++d+ky++g+r nrat++gyWkatgkd++++s
  C.cajan_40311  21 LPLGFRFRPTDEELIDYYLRSKINGNGDDV-WVIREVDVCKWEPWDLPdMsVVRNKDPEWFFFCPQDRKYPNGHRLNRATNNGYWKATGKDRRIKS 115
                    699************************999.89**************96336667778************************************** PP

            NAM  95 kkgelvglkktLvfykgrapkgektdWvmheyr 127
                     ++ l+g+kktLvfy+grapkg++t+Wvmheyr
  C.cajan_40311 116 -GSMLIGMKKTLVFYTGRAPKGKRTNWVMHEYR 147
                    .9******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-6213171IPR003441NAC domain
PROSITE profilePS5100556.68621171IPR003441NAC domain
PfamPF023651.2E-2722147IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0071470Biological Processcellular response to osmotic stress
GO:1900426Biological Processpositive regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 572 aa     Download sequence    Send to blast
MGAVVECYPS PRTAVLSLNT LPLGFRFRPT DEELIDYYLR SKINGNGDDV WVIREVDVCK  60
WEPWDLPDMS VVRNKDPEWF FFCPQDRKYP NGHRLNRATN NGYWKATGKD RRIKSGSMLI  120
GMKKTLVFYT GRAPKGKRTN WVMHEYRPTL KELDGTNPGQ NPYVLCRLFK KQDESIECSN  180
GDDVERNTST PTTANYSPDE IPSDSALVPA SSSQVTEDDK PPAVITENSE EAISNIISPG  240
DCHSDGCDAP RALKHIVEPA AEEDLPFDVN IFFNTTEPLD DKLFSPVHAH FPQEIYYQTN  300
NQPELQYGTN ETNFSNIFES INWDAFSYDT SSLDVSSSLL NIKDNGSGSD SDVEMANITH  360
LQGFDYPKAA VEPNSNVGLF QNNNQMAFSN DDSMGQVHNV VNNYEQPRNF DTFVNGDTGI  420
RIRARQGRNE PNMNKVAQLQ GIAPRRIRLG VVRRPPGSLT KDENCACAPE DQNSKSIISG  480
ERKASENLAA DESSTVTNDV DEPEKASAES ADIRKTNQQH FATVKSISGV KNSRYTSKVS  540
FNRAMWSYVL AVSAIVLVSV ILLVQIWGYV RS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-45121747171Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00108PBMTransfer from AT4G35580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_40311
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX5690450.0JX569045.1 Glycine max NAC transcription factor (NAC012) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020205492.10.0NAC domain-containing protein 62
TrEMBLA0A151R1U70.0A0A151R1U7_CAJCA; NAC domain-containing protein 78
STRINGGLYMA14G36840.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55513353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G49530.13e-95NAC domain containing protein 62