PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_38429
Common NameKK1_035711
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family TALE
Protein Properties Length: 623aa    MW: 67911.9 Da    PI: 7.448
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_38429genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.3e-093674041954
                    HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
       Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                    Fe   ++yp+ +++  LAk++gLt +qV++WF N R +
  C.cajan_38429 367 FEHflHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVR 404
                    564459******************************88 PP
2BELL122.41.9e-39231302172
           BELL   1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                    erqe+q+kkakL+++l+eV++rY+qy+ q+q+vissFe++ag+gsa+ Yt+lAl++iS++FrcLkdai++qi
  C.cajan_38429 231 ERQEIQMKKAKLINMLDEVEQRYRQYHSQMQIVISSFEQAAGIGSARTYTALALQTISKQFRCLKDAITGQI 302
                    79*********************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005742.8E-65158300IPR006563POX domain
PfamPF075262.6E-49163299IPR006563POX domain
PROSITE profilePS5007112.195345408IPR001356Homeobox domain
SMARTSM003895.3E-9348412IPR001356Homeobox domain
CDDcd000865.95E-12348409No hitNo description
SuperFamilySSF466896.84E-17349415IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.608.7E-29351414IPR009057Homeodomain-like
PfamPF059202.5E-18365404IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    Send to blast
MATYFHSNSE IQAGADGLQT LVLMNPGYVQ YSDTPPPPPP HGGNIMFLNS ATTVAGNTSL  60
QSLPHAPSPH TQQFVGVPLS AAAQDPPPSM HHDVSALHGF LPRMQYNLWN TIDPGAAARE  120
ASRAATRGLS LSLHAQPGED VRASSSSASG ASNGGGVAGI QSVLLSSKYL KATQELLDEV  180
VNVNSGIKVE QAKKSFEKTK VVVESSTAAS GDGSAGGDGS GKRSSELSTT ERQEIQMKKA  240
KLINMLDEVE QRYRQYHSQM QIVISSFEQA AGIGSARTYT ALALQTISKQ FRCLKDAITG  300
QIRAANKSLG EEDCLGGKIE GSRLKYVDHH LRQQRAIQQL GMIHHNAWRP QRGLPERSVS  360
VLRAWLFEHF LHPYPKDSDK HMLAKQTGLT RSQVSNWFIN ARVRLWKPMV EEMYLEEMKE  420
HELNGSKQDV SKSHNTQIAS TSPSTSPTGG NLKNQSGFSF MGSSELDGIT QGSPKKPRNH  480
EILHSSNLDV KSNEASNEQL SMDERQSRDG YSFMGNQTNF ISGFGQYPME EIGRFDAEQF  540
TPRFPGNGVS LTLGLPHCDT LSGTHQTFLP NQNIQLGRGL DIGEPNQFGA LNNSTSHSSA  600
AFESINMQNP KRFAAQLLPD FVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3k2a_A3e-16354412563Homeobox protein Meis2
3k2a_B3e-16354412563Homeobox protein Meis2
4xrs_A3e-16354411158Homeobox protein Meis1
4xrs_B3e-16354411158Homeobox protein Meis1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_38429
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKT0311670.0KT031167.1 Glycine max clone HN_CCL_176 homeodomain/HOMEOBOX transcription factor (Glyma10g10040.2) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020239097.10.0BEL1-like homeodomain protein 1
RefseqXP_020239098.10.0BEL1-like homeodomain protein 1
RefseqXP_029124599.10.0BEL1-like homeodomain protein 1
SwissprotQ9SJ561e-177BLH1_ARATH; BEL1-like homeodomain protein 1
TrEMBLA0A151RJW40.0A0A151RJW4_CAJCA; BEL1-like homeodomain protein 1
STRINGGLYMA10G10040.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16273492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35940.31e-166BEL1-like homeodomain 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]