PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_37341
Common NameKK1_038960
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 405aa    MW: 46598.9 Da    PI: 5.934
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_37341genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.11.2e-47101381127
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                    +p+GfrF+Ptdeelv++yL++k+ ++++++ ++i+e+d++kvePwd p +  +k++++ew+fFs+ d ky+++kr nr+t++gyWk+tgkd+++ +
  C.cajan_37341  10 VPVGFRFRPTDEELVNYYLRHKLLHDDFPV-HIIPEIDVCKVEPWDVPaRsVIKSDDQEWFFFSPVDYKYQNSKRVNRTTEHGYWKSTGKDRNIRR 104
                    599***************************.89**************95257888999************************************** PP

            NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyr 127
                    + +++++g+kktLvf++gr p+g k++Wv+hey+
  C.cajan_37341 105 RgSTNVIGTKKTLVFHRGRVPDGAKSNWVIHEYQ 138
                    966678***************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-537157IPR003441NAC domain
PROSITE profilePS5100552.38310157IPR003441NAC domain
PfamPF023651.8E-2511138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MENISMLDHV PVGFRFRPTD EELVNYYLRH KLLHDDFPVH IIPEIDVCKV EPWDVPARSV  60
IKSDDQEWFF FSPVDYKYQN SKRVNRTTEH GYWKSTGKDR NIRRRGSTNV IGTKKTLVFH  120
RGRVPDGAKS NWVIHEYQAI TSHQTQRTFV LCRLMKKAEK KTEREIEAPN FDEGEPSRRV  180
VPDHEIPATP VEIPSVSLTE IDIEAILQAM QESPTDIASD IDVYFRNDNQ TQTPFEATDD  240
EDEFVNSIWA DDEEFVINEE RRHCFVNSST QPKSLRRVYN GSSEIDAEVV SNLHDNINSG  300
EYPTLKIFKS SHDAIRGGTS WIASNHEANI EKKQNIIQDD FGAVETSSCD STPDEPLERG  360
RTDNFILQRT VTGRTKIQRK VSNNAVSKVE VRKPSSCARK IKFVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A9e-39915714168Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_37341
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150427e-57AP015042.1 Vigna angularis var. angularis DNA, chromosome 9, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_029125096.10.0uncharacterized protein LOC109788497
TrEMBLA0A151RAR50.0A0A151RAR5_CAJCA; NAC domain-containing protein 78
STRINGGLYMA07G05351.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-57NAC 014