PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_37130

Common Name

KK1_036955

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Trihelix

Protein Properties

Length: 291aa MW: 33208.4 Da PI: 8.4564

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_37130	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	64.3	2.7e-20	10	101	2	86
trihelix 2 WtkqevlaLiearr.emeerlrr......gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt qe+l+Li+a++ ++e+rl++ g++ + +W++v ++++++g+ rs++qC++kw+nl ++ykk++e e k ++++ +++p + +e C.cajan_37130 10 WTLQETLTLITAKKlDDERRLKTtarnsgGSSGELRWKWVENYCWRHGCLRSQNQCNDKWDNLLRDYKKVREYEAKASDNNNKEFPSYWTME 101 ***********95444444442222334699******************************************************998 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50090	6.934	2	73	IPR017877	Myb-like domain
Pfam	PF13837	2.9E-13	9	101	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 291 aa Download sequence Send to blast
MVREYRKGNW TLQETLTLIT AKKLDDERRL KTTARNSGGS SGELRWKWVE NYCWRHGCLR 60 SQNQCNDKWD NLLRDYKKVR EYEAKASDNN NKEFPSYWTM EKHQRKELKL PSNMLLQVYQ 120 AVTQVLQRKS SHVIITPLQP VPLLIASSSH DTSPVVATQP PPLSIPPPPP PPPLPPPPQP 180 VSEGSESSGT EYNDEDDNSE SKRRKFEKLG SSIMHSASEL AQALGSCEEK KEKRHQEMMQ 240 LQQLRLQMEE TRNQMNQQEY TNLVSAVTNL TGVIQSLITS MTKANSDACS S

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_37130

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020240069.1	0.0	trihelix transcription factor GTL1 isoform X1
TrEMBL	A0A151RGE0	0.0	A0A151RGE0_CAJCA; Uncharacterized protein
STRING	XP_007153114.1	1e-119	(Phaseolus vulgaris)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6804	32	42

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-49	Trihelix family protein