![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | C.cajan_36760 | ||||||||
Common Name | KK1_041213 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 103aa MW: 11929.1 Da PI: 10.7033 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 61.6 | 1.3e-19 | 6 | 54 | 3 | 51 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 ++++l dls yF+ pik+ Ak L+v+++v+K+ CR+ + RWP+Rk+ks C.cajan_36760 6 AKMTLGDLSDYFHIPIKETAKLLEVSTSVVKKVCRKAELYRWPQRKVKS 54 6899*******************************************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 14.959 | 1 | 75 | IPR003035 | RWP-RK domain |
Gene3D | G3DSA:1.10.10.10 | 7.2E-4 | 3 | 48 | IPR011991 | Winged helix-turn-helix DNA-binding domain |
Pfam | PF02042 | 2.4E-18 | 7 | 54 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 103 aa Download sequence Send to blast |
QRERVAKMTL GDLSDYFHIP IKETAKLLEV STSVVKKVCR KAELYRWPQR KVKSNMRKIT 60 VLRRGLANPG TREKTRVEIQ RLQQEMVEYC GGLAPTGIEM LQV |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | C.cajan_36760 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020204700.1 | 3e-68 | uncharacterized protein LOC109790026 isoform X1 | ||||
Refseq | XP_029128279.1 | 6e-71 | protein RKD3-like | ||||
TrEMBL | A0A151R4P8 | 2e-69 | A0A151R4P8_CAJCA; Uncharacterized protein (Fragment) | ||||
STRING | XP_007136870.1 | 5e-33 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7478 | 28 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G53040.1 | 3e-10 | RWP-RK domain-containing protein |