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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
C.cajan_36292 |
| Common Name | KK1_039599 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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| Family |
MYB |
| Protein Properties |
Length: 329aa MW: 37436.8 Da PI: 5.1735 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_36292 | genome | IIPG | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.9 | 7.4e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl
C.cajan_36292 16 RGPWSPSEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWINYL 63
89******************************99************97 PP
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| 2 | Myb_DNA-binding | 52.3 | 1.3e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T eE+e +++++k lG++ W++Ia++++ gRt++++k+ w+++l
C.cajan_36292 69 RGSFTLEEEETIIRLHKALGNK-WSKIASRLP-GRTDNEIKNVWNTHL 114
899*******************.*********.************986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009809 | Biological Process | lignin biosynthetic process |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MGRGRAPCCD KSQVKRGPWS PSEDLKLIAF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI 60
NYLRPDVKRG SFTLEEEETI IRLHKALGNK WSKIASRLPG RTDNEIKNVW NTHLKKRSVA 120
KKSLNSSADE SKPDSSITSS FSSSSESFFS NERPNSPKTT TLVSLSSIES NIATSSQDVA 180
CKAEQLLASP LSYLGSYDFG SILEEVDKPN HLFEIPWESD YDFCKLLDDD NFGSFQSNEV 240
QLSEFPASQN VILEEEIVQD VKVTQWPHDF ENKFGVVGEI KESNKDHFLP KNYEVGPEID 300
HTQTFDLDDM RTPEAELDFG YIQLWPSWS
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