 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
C.cajan_36291 |
| Common Name | KK1_039596 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
| Family |
MYB |
| Protein Properties |
Length: 373aa MW: 42452.1 Da PI: 4.9452 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_36291 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 49.6 | 8.9e-16 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+W++ Ed++l+ ++++G ++W++ ++ g+ R++k+c++rw +yl
C.cajan_36291 16 RGPWSPSEDLKLIAFIQKYGHENWRALPKQAGLLRCGKSCRLRWINYL 63
89******************************99************97 PP
|
| 2 | Myb_DNA-binding | 50.4 | 5.1e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T+ E+e +++++k lG++ W++Ia+ ++ gRt++++k+ w+++l
C.cajan_36291 69 RGNFTPKEEETIIRLHKALGNK-WSKIASSLP-GRTDNEIKNVWNTHL 114
89********************.*********.************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009751 | Biological Process | response to salicylic acid |
| GO:0009753 | Biological Process | response to jasmonic acid |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:2000652 | Biological Process | regulation of secondary cell wall biogenesis |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 373 aa
Download sequence Send
to blast |
MGKGRAPCCD KTQVKRGPWS PSEDLKLIAF IQKYGHENWR ALPKQAGLLR CGKSCRLRWI 60
NYLRPDVKRG NFTPKEEETI IRLHKALGNK WSKIASSLPG RTDNEIKNVW NTHLKKRLTA 120
KKCSDSSADE SKPESSITSS SSSSSESFFS NETPNSPKTT TLGNEFNDQA SQVTDKIEQD 180
SDKQVSNELN GIITKDPKES SVSFSSIGSN IVTTSQNVAY KEKQQLASPL SYLGPYDFSS 240
MLEEVDKPNH LFERPWESDF VLWKILRDDS LGSFQSNEVQ LGEFLACQNS ILGEEIVQDV 300
EARKWFHDFE DEFGIVDEIK ESNNDHFLPK NYAVEPEIDH TQTFDFDDIT RPESELDFGY 360
IQLWSSWPQN TSL
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | JN863531 | 2e-75 | JN863531.1 Lotus japonicus R2R3MYB transcription factor (MYB10) mRNA, partial cds. |
