PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_34115
Common NameKK1_037154
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 340aa    MW: 38616.1 Da    PI: 7.436
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_34115genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.83.6e-52131392128
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.k 96 
                    ppGfrFhP+deel+v+yL++k+++++l++ ++i+e+d+yk++Pw+Lp+k   +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++ls+ +
  C.cajan_34115  13 PPGFRFHPSDEELIVHYLQNKISSRPLPA-SIIAEIDLYKYNPWELPNKSLFGEEEWYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKPILSSsG 107
                    9****************************.89***************8777899**************************************9977 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                    ++ +g+kk Lvfy+gr pkg+ktdW+m+eyrl
  C.cajan_34115 108 SKRIGVKKALVFYSGRPPKGSKTDWIMNEYRL 139
                    888***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-639166IPR003441NAC domain
PROSITE profilePS5100560.73712166IPR003441NAC domain
PfamPF023651.0E-2613139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    Send to blast
MEGDQQGSHY SFPPGFRFHP SDEELIVHYL QNKISSRPLP ASIIAEIDLY KYNPWELPNK  60
SLFGEEEWYF FSPRDRKYPN GLRPNRAAAS GYWKATGTDK PILSSSGSKR IGVKKALVFY  120
SGRPPKGSKT DWIMNEYRLI DTATSSSRLK GSMRLDDWVL CRVRHKGYSL KNSCENQENP  180
SELNLPAKLA SSEEYPTNMN GRVDMITDYQ FKDYQIIASI LVGGPIPPTE NMPNLSLKGC  240
KSNNLFSVYE DGSSKVNSQT TIPSFDSYFN PLTRKSNEDE QYGNLISFKD ASPSKVLNRR  300
ELNCYNQSQS QDDIFNGNAP DPSINFQELN ELAFTGRYPQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-70816613165NO APICAL MERISTEM PROTEIN
1ut4_B1e-70816613165NO APICAL MERISTEM PROTEIN
1ut7_A1e-70816613165NO APICAL MERISTEM PROTEIN
1ut7_B1e-70816613165NO APICAL MERISTEM PROTEIN
3swm_A1e-70816616168NAC domain-containing protein 19
3swm_B1e-70816616168NAC domain-containing protein 19
3swm_C1e-70816616168NAC domain-containing protein 19
3swm_D1e-70816616168NAC domain-containing protein 19
3swp_A1e-70816616168NAC domain-containing protein 19
3swp_B1e-70816616168NAC domain-containing protein 19
3swp_C1e-70816616168NAC domain-containing protein 19
3swp_D1e-70816616168NAC domain-containing protein 19
4dul_A1e-70816613165NAC domain-containing protein 19
4dul_B1e-70816613165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_34115
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-138AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020240206.10.0NAC transcription factor 32
TrEMBLA0A151RFV40.0A0A151RFV4_CAJCA; NAC domain-containing protein 29
STRINGGLYMA13G40251.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24162981
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.19e-82NAC-like, activated by AP3/PI