PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33952
Common NameKK1_034593
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family Trihelix
Protein Properties Length: 356aa    MW: 40647.6 Da    PI: 8.4817
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33952genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix68.51.3e-211151812585
       trihelix  25 k.....lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 
                    +     +kk++W++vsk+m+erg+++sp+qC++k+++lnkrykk++++ +++ +++++++ +++d +
  C.cajan_33952 115 RkftvlQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGtSCQVVENPALLDVI 181
                    1333449*********************************************569999888887765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138379.0E-19120208No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MEGNLSQGGM IQGGGSSFGG FDLPGSMRVH RQAQHPHSMN QHQTHPCQGS GVHSSVHDGF  60
PLTMGTLQNC DQTMSMTEFS QGDRSKNSPS DEDEPSFAEE GGDGHHEAGR GKKGRKFTVL  120
QKKGKWKSVS KVMAERGYHV SPQQCEDKFN DLNKRYKKLN DMLGRGTSCQ VVENPALLDV  180
IDYLSEKEKD DVRKILSSRH LFYEEMCSYH NGNRLHLPHD PALQRSLQLA LRNRDDHDND  240
DIRRGLYGAS GGSLKRLRVG HGQEDAATFG TLPENMRAAW LQKQWVESRS LQLEEQKLQI  300
QVEMLELEKQ RFKWQKFSKK KDRELEKLKL ENERMKLENE RIALELKRKE MGTGFN
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33952
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150441e-132AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020238098.10.0uncharacterized protein LOC109817291
TrEMBLA0A151RN740.0A0A151RN74_CAJCA; Uncharacterized protein
STRINGGLYMA10G36980.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF50013157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21200.11e-108sequence-specific DNA binding transcription factors