PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_33950

Common Name

KK1_034591

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

Trihelix

Protein Properties

Length: 373aa MW: 42097.3 Da PI: 7.6636

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_33950	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	78.3	1.2e-24	124	221	1	84
trihelix 1 rWtkqevlaLiearremeerlrrgk.............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyf 82 +Wt+++v++Li+a ++++e+ ++ +kk++W++vsk+m+erg ++sp+qC++k+++lnkrykk++++ +++ t++++++ ++ C.cajan_33950 124 KWTDKMVKLLITALSYIGEDAASDGggggiarrkftalQKKGKWRSVSKAMAERGHHVSPQQCEDKFNDLNKRYKKLNDMLGRGtTCQVVENPGLL 219 7**************999998655677778888899*******************************************9779999888777 PP trihelix 83 dq 84 d C.cajan_33950 220 DV 221 65 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF13837	2.0E-23	122	249	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence Send to blast
MEGNLSQGGM IQGGASFGGF DLPNSIRVHL QQAQQHPHSM NQHQTHPCLG SSVQSSFQDG 60 FPLTMGTFQK CDQNQTPSLT DFSQGDRNKN SPSDEEEPSF AEEGVDGHQE AARAKKPSPW 120 QRVKWTDKMV KLLITALSYI GEDAASDGGG GGIARRKFTA LQKKGKWRSV SKAMAERGHH 180 VSPQQCEDKF NDLNKRYKKL NDMLGRGTTC QVVENPGLLD VIDYLSEKDK DDVRKILNSR 240 HLFYEEMCSY HNGQGQEDSA ATFGSALNSL EHNKSSFPQM VQSDVSQALP ENMKAALSQK 300 QSVEPRALQL EEKKLQIQAE FLELEKQRFL WQKFSIKKNR ELESIKLENE RMKLENERMA 360 LELKRKESKT IHA

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence Send to blast

MEGNLSQGGM IQGGASFGGF DLPNSIRVHL QQAQQHPHSM NQHQTHPCLG SSVQSSFQDG  60
FPLTMGTFQK CDQNQTPSLT DFSQGDRNKN SPSDEEEPSF AEEGVDGHQE AARAKKPSPW  120
QRVKWTDKMV KLLITALSYI GEDAASDGGG GGIARRKFTA LQKKGKWRSV SKAMAERGHH  180
VSPQQCEDKF NDLNKRYKKL NDMLGRGTTC QVVENPGLLD VIDYLSEKDK DDVRKILNSR  240
HLFYEEMCSY HNGQGQEDSA ATFGSALNSL EHNKSSFPQM VQSDVSQALP ENMKAALSQK  300
QSVEPRALQL EEKKLQIQAE FLELEKQRFL WQKFSIKKNR ELESIKLENE RMKLENERMA  360
LELKRKESKT IHA

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_33950

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020238100.1	0.0	uncharacterized protein LOC109817293
Refseq	XP_020238101.1	0.0	uncharacterized protein LOC109817293
TrEMBL	A0A151RN20	0.0	A0A151RN20_CAJCA; Uncharacterized protein
STRING	POPTR_0005s21390.1	1e-159	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF24338	3	3

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	1e-108	sequence-specific DNA binding transcription factors