PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_33428
Common NameKK1_030180
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 158aa    MW: 17931.1 Da    PI: 10.1045
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_33428genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-162878255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgt.aeeAakaaiaarkkleg 55
                    y+G+r +k +g+WvAeIr+p   +kr r++lg++ t +  Aa+a++ a  +l+g
  C.cajan_33428 28 PYRGIRMRK-WGKWVAEIREP---NKRSRIWLGSYTTpPVAAARAYDTAVFYLRG 78
                   69*****99.**********9...336**********999*************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.18E-182887IPR016177DNA-binding domain
SMARTSM003804.3E-342892IPR001471AP2/ERF domain
PROSITE profilePS5103219.3482886IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-282987IPR001471AP2/ERF domain
PRINTSPR003677.1E-122940IPR001471AP2/ERF domain
PfamPF008471.0E-92978IPR001471AP2/ERF domain
CDDcd000187.96E-262988No hitNo description
PRINTSPR003677.1E-126888IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MEDRDQCCSK NSKPKKPQHR ENSKAMKPYR GIRMRKWGKW VAEIREPNKR SRIWLGSYTT  60
PPVAAARAYD TAVFYLRGPS ARLNFPELLF QDDQEGNDSV QHGAGNMSAD SIRRKATQVG  120
ARVDALQTAL HHHASSHSSS NSLKPDLNEF PKLEDLQD
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-132786463ATERF1
3gcc_A1e-132786463ATERF1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_33428
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAF5149081e-106AF514908.1 Glycine max dehydration responsive element binding protein (DREB1) mRNA, complete cds.
GenBankKT0310881e-106KT031088.1 Glycine max clone HN_CCL_2 AP2-EREBP transcription factor (Glyma14g09320.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020234285.11e-103ethylene-responsive transcription factor RAP2-1
SwissprotQ8LC303e-49RAP21_ARATH; Ethylene-responsive transcription factor RAP2-1
TrEMBLA0A151S0B41e-116A0A151S0B4_CAJCA; Ethylene-responsive transcription factor RAP2-1
STRINGGLYMA14G09320.16e-88(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF129032106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G46768.17e-49related to AP2 1
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]