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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_33067 | ||||||||
Common Name | KK1_037392 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | B3 | ||||||||
Protein Properties | Length: 170aa MW: 20117.1 Da PI: 10.1946 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.3 | 3.4e-19 | 4 | 80 | 16 | 98 |
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 ++p kf++++g+ + s t+ l+ ++g +W+v+l +k++++++++kGWkeFv + L g +vF++dg+ f +v +++ C.cajan_33067 4 QRIPAKFVRKYGK--HLSNTVFLKLPNGAEWRVNL--EKRDDSVWFQKGWKEFVAYHSLAHGNLLVFRYDGTPHF--HVLICD 80 68*********94..5999****************..*********************************99999..999997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50863 | 14.607 | 1 | 82 | IPR003340 | B3 DNA binding domain |
Gene3D | G3DSA:2.40.330.10 | 1.4E-23 | 3 | 82 | IPR015300 | DNA-binding pseudobarrel domain |
SMART | SM01019 | 1.3E-10 | 3 | 82 | IPR003340 | B3 DNA binding domain |
Pfam | PF02362 | 1.2E-15 | 3 | 80 | IPR003340 | B3 DNA binding domain |
SuperFamily | SSF101936 | 1.8E-22 | 4 | 81 | IPR015300 | DNA-binding pseudobarrel domain |
CDD | cd10017 | 1.78E-17 | 5 | 80 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 170 aa Download sequence Send to blast |
SAQQRIPAKF VRKYGKHLSN TVFLKLPNGA EWRVNLEKRD DSVWFQKGWK EFVAYHSLAH 60 GNLLVFRYDG TPHFHVLICD MSATEIEYPV SKPNHKRAKI SSQEIQPRKT RRTNRKDEKS 120 NSNLQDVVAF DQKVKNHKGK FLESYFLIYL FVRFLAIELE GYKEFCFVYV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_33067 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_014634074.1 | 4e-65 | B3 domain-containing protein At1g49475-like | ||||
TrEMBL | A0A151RF19 | 1e-124 | A0A151RF19_CAJCA; B3 domain-containing protein At1g49475 family (Fragment) | ||||
STRING | GLYMA08G44640.1 | 1e-62 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF98 | 34 | 369 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49475.1 | 3e-24 | B3 family protein |