PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32591
Common NameKK1_033766
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 305aa    MW: 34928.6 Da    PI: 5.4244
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32591genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY82.15.6e-26123183259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    dDgy+WrKYGqKe+ +++fpr+Y+rCt++   gC+++k+v++ +edp ++++tY g H+++
  C.cajan_32591 123 DDGYQWRKYGQKEILNAKFPRNYFRCTHKfdqGCQATKQVQKVQEDPILFKTTYYGIHTCK 183
                    8***************************9999***************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.4E-27110184IPR003657WRKY domain
PROSITE profilePS5081120.415117180IPR003657WRKY domain
SuperFamilySSF1182906.15E-25120183IPR003657WRKY domain
SMARTSM007745.1E-38122184IPR003657WRKY domain
PfamPF031067.3E-25123183IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MDNNNLGYSR RKAIEELVRG HDHAKQLRSV INGSCSDDRS ATPFAEKLVK EVLMSFTNSL  60
LFLNNTTTSE PHDASDVQVW DSPKSEDSQE SNCKTSTVKE RRGCYKRRRT EQTWEKESEA  120
PIDDGYQWRK YGQKEILNAK FPRNYFRCTH KFDQGCQATK QVQKVQEDPI LFKTTYYGIH  180
TCKNLSNPEI ILDPMSPSTS SKFLSFDNSF PTPSNQECPF FSSSFPSSVV KRECKEEVPP  240
STSSNDYLIS SELTFDSSPR HHVTLSSTLD SEYKSEDLDV LYDHAHLDDV LNPSLNFDNF  300
SCFDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A1e-21122183869OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32591
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3753530.0EU375353.1 Glycine max transcription factor (WRKY57) mRNA, complete cds.
GenBankKT0312410.0KT031241.1 Glycine max clone HN_CCL_112 WRKY transcription factor (Glyma18g44560.1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237415.10.0WRKY DNA-binding transcription factor 70
TrEMBLA0A151RQ720.0A0A151RQ72_CAJCA; Putative WRKY transcription factor 70
STRINGGLYMA18G44560.11e-169(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19953486
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.15e-38WRKY DNA-binding protein 70