PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32192
Common NameKK1_034302
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 289aa    MW: 32120.9 Da    PI: 7.4987
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32192genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.5e-30140198259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dgy+WrKYGqK+ ++++ pr+Y++C++a gCpvkkkv+rs edp+v+++tYegeHnh 
  C.cajan_32192 140 RDGYQWRKYGQKVTRDNPSPRAYFKCSYApGCPVKKKVQRSVEDPSVLVTTYEGEHNHG 198
                    7***************************99****************************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.807.8E-30130200IPR003657WRKY domain
SuperFamilySSF1182902.48E-26136200IPR003657WRKY domain
SMARTSM007746.8E-36139199IPR003657WRKY domain
PfamPF031061.6E-25141197IPR003657WRKY domain
PROSITE profilePS5081127.554141200IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    Send to blast
MEPTCIDTSL NLNVIPSPSP HIDHVAQVLV EELQRLNSEN KRLTETLNHV CENYVALQKH  60
LSEFSQLRNT DVDKEATPSL KRKVESDNNC VNLFGINAYT ECSTTTEEES FKRAKHNSTS  120
PKVYKVSVRT DASDTSLYVR DGYQWRKYGQ KVTRDNPSPR AYFKCSYAPG CPVKKKVQRS  180
VEDPSVLVTT YEGEHNHGQP QMEISMNSSQ SDSPSSAGSV AMNRSAAGPI VTLDLVQSKL  240
VDINAQKSSI QQFLVQQMAT SLTRDPNFTA ALATAISGRF LEDTTVGKR
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-221412001977Probable WRKY transcription factor 4
2lex_A7e-221412001977Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32192
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0959761e-129BT095976.1 Soybean clone JCVI-FLGm-15G12 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237885.10.0probable WRKY transcription factor 40
TrEMBLA0A151RNU00.0A0A151RNU0_CAJCA; Putative WRKY transcription factor 40
STRINGGLYMA06G06530.11e-158(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF97334115
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.19e-71WRKY DNA-binding protein 40