PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_32034
Common NameKK1_033983
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 459aa    MW: 51512.7 Da    PI: 6.5289
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_32034genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.16.5e-11408457147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      + +W+  E+e l  +v+++G g+W+tI +      ++R++ ++k++w++ 
    C.cajan_32034 408 KRKWSSLEEETLRAGVQMFGEGNWATIRSFYSnvfENRSGVDLKDKWRNM 457
                      569*********************************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.2E-14403459IPR009057Homeodomain-like
PROSITE profilePS5129415.501403459IPR017930Myb domain
SuperFamilySSF466895.62E-15405458IPR009057Homeodomain-like
SMARTSM007174.7E-6407459IPR001005SANT/Myb domain
PfamPF002491.3E-8408457IPR001005SANT/Myb domain
CDDcd116601.31E-17409459No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 459 aa     Download sequence    Send to blast
MDSDISRWVL EFLLRSSVPD SLIQKALTSL PLSGADLRLK HTLLLRTLHT LLLHASLPDT  60
ALHILELLEP HSNDASAASL RRAYRAVAVE CTVKYLAAVP DAPSAEYSAA VDRIWRGRVA  120
ALEARRSGIA SSGELARWRD DVEAAVWDPR VRERLAGLNS RKEAFDEVGA YLKEAWEAMG  180
PSFLESMSNA KGQEGLENSA KEKERSDYDD DDGDACMKNL ATRDGNEEVG GGDLPPQRGK  240
ETQKRKSQLK HKHSALRTCN RGVKISDPEE VEPAKWKSKH DPVPSAEASK VRESLKSSSL  300
ELQALVEDPL PDALHKSEVI RSKSATRDTN IEPPIENQSE DVDVPDPDVC RSIVLFQPKD  360
ANLVKKSPDP CSNVHQPNIM ERNRTARTYE WEDSTDNSSQ ARQTRRRKRK WSSLEEETLR  420
AGVQMFGEGN WATIRSFYSN VFENRSGVDL KDKWRNMIR
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_32034
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020237621.10.0uncharacterized protein LOC109816880
TrEMBLA0A151RPR40.0A0A151RPR4_CAJCA; Telomeric repeat-binding factor 2
STRINGXP_007146880.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.11e-16TRF-like 5