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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
C.cajan_30491 |
| Common Name | KK1_033051 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
| Family |
MYB |
| Protein Properties |
Length: 379aa MW: 42678.6 Da PI: 8.7216 |
| Description |
MYB family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| C.cajan_30491 | genome | IIPG | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 51.5 | 2.4e-16 | 127 | 172 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
rg W + Ed +l+++v+++G+ +W++Ia+++ gR++k+c++rw++
C.cajan_30491 127 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 172
899*****************************.***********996 PP
|
| 2 | Myb_DNA-binding | 55.8 | 1.1e-17 | 179 | 222 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+
C.cajan_30491 179 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 222
678*******************.*********.***********96 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010199 | Biological Process | organ boundary specification between lateral organs and the meristem |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 379 aa
Download sequence Send
to blast |
MAKSKCCMIS SQQSQNASSC YPFPSLSMMG SLSLASSNCA TLSNASSSQE SCGYASPNGR 60
STSWTFPFMR EFLSSNFEVC SDVVGVGESN SCDKIKQSAR FNEESNPNEN LVSGKEVDSG 120
NSKLCARGHW RPAEDSKLKE LVALYGPQNW NLIAEKLEGR SGKSCRLRWF NQLDPRINRR 180
AFSEEEEERL MQAHRIYGNK WAMIARLFPG RTDNAVKNHW HVIMARKYRE QSSAYRRRRM 240
SQSVYTRVEQ NPSFFGLNGY GEREAMSNTP RHVGMCAQQA PFDFFSVGRS NDMMGESTSQ 300
VRFRERTNES HNHNCQLSGF YPHYPQQHLT AMQQLDNNFY SVLKSSSAST TSTAKEPSSS 360
PYGVPLPPQF FDFLGVGAT
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015043 | 1e-110 | AP015043.1 Vigna angularis var. angularis DNA, chromosome 10, almost complete sequence, cultivar: Shumari. |
