PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_29871 | ||||||||
Common Name | KK1_032793 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | NAC | ||||||||
Protein Properties | Length: 271aa MW: 30486.6 Da PI: 8.2049 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 165.9 | 1.4e-51 | 11 | 134 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 ppGfrFhPtdeelvv+yL++k++++++ + +i+e+d+yk++PwdLp + +ekewyfFs+r++ky++g+r+nr++ +gyWkatg dk++ + C.cajan_29871 11 PPGFRFHPTDEELVVHYLCPKCASHQIAV-PIIAEIDLYKYDPWDLPGLALYGEKEWYFFSPRERKYPNGSRPNRSAGTGYWKATGADKPIGK--P 103 9*************************999.88***************6555679*************************************98..7 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + vg+kk Lvfy g+apkgekt+W+mheyrl C.cajan_29871 104 KPVGIKKALVFYAGKAPKGEKTNWIMHEYRL 134 89***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 9.68E-62 | 3 | 160 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 59.585 | 10 | 160 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.1E-27 | 11 | 134 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009611 | Biological Process | response to wounding | ||||
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence Send to blast |
MAATAPHLHF PPGFRFHPTD EELVVHYLCP KCASHQIAVP IIAEIDLYKY DPWDLPGLAL 60 YGEKEWYFFS PRERKYPNGS RPNRSAGTGY WKATGADKPI GKPKPVGIKK ALVFYAGKAP 120 KGEKTNWIMH EYRLADVDRS ARKKNTLRLD DWVLCRIYNK KGSIEKQPPS VTRKMECSEM 180 EEKPGIATRG GAAADSVHFE ASDSVPRLHT ADSSCSEHAV SPEFASEVQS EPKRGNEFAF 240 NYVDATLGSQ FQSGDQMLPL QDIFMYLSKP F |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-78 | 8 | 166 | 13 | 174 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00121 | DAP | Transfer from AT1G01720 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_29871 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020236522.1 | 0.0 | NAC domain-containing protein 2 | ||||
Swissprot | Q39013 | 1e-140 | NAC2_ARATH; NAC domain-containing protein 2 | ||||
TrEMBL | A0A151RSZ6 | 0.0 | A0A151RSZ6_CAJCA; NAC domain-containing protein 2 | ||||
STRING | GLYMA14G24220.1 | 1e-161 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1258 | 34 | 108 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-131 | NAC family protein |